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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021662492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25788.1 Da PI: 5.7607 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.2 | 5.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCda+va+i+fsstgkl+ey+s XP_021662492.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLFEYCS 59 68***********************************************96 PP | |||||||
2 | K-box | 53.2 | 1.3e-18 | 93 | 172 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++L kei + +++R++ Ge+L+ L+++eLqqLe+ Le +l+++ +kK e ++++i+elq k +l een++Lr+++ XP_021662492.1 93 NHSRLSKEIAEKSHQLRQMRGEELQGLNIEELQQLEKSLEAGLSRVIEKKGEKIIKEIRELQTKGMQLMEENERLRQQVV 172 6789999999999****************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIVFSS TGKLFEYCSS 60 SMKEILEKHD LHSKNLEKLE QPSLELQLVE DSNHSRLSKE IAEKSHQLRQ MRGEELQGLN 120 IEELQQLEKS LEAGLSRVIE KKGEKIIKEI RELQTKGMQL MEENERLRQQ VVEISNGRKQ 180 AAADSENLVY EEGQSSESVT NVCNSNGPPH DYESSDTSLK LGLPYNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-118 | MIKC_MADS family protein |