PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659606.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27594.5 Da PI: 9.7253

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.5	3.5e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA ELS+LCdaev viifsstgkly+y+s XP_021659606.1 10 RIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGVIIFSSTGKLYDYAS 59 8***********************************************86 PP
2	K-box	82	1.3e-27	81	171	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ + +q+e+a L+ke++ Lq+ +R+l+Ge+L+ Ls+k+Lq+Le+qLe slk +R kK+++l+++i+e+ +k + + +en +L+kk++ XP_021659606.1 81 NPASEIKFWQREAASLRKELQYLQEYHRQLMGEELSGLSVKDLQNLENQLEMSLKGVRMKKDQILTDEIKEQNRKGNLTYQENLKLHKKVD 171 678899**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KARELSILCD AEVGVIIFSS TGKLYDYAST 60 SMNSVIERYN KLKEEQNQLM NPASEIKFWQ REAASLRKEL QYLQEYHRQL MGEELSGLSV 120 KDLQNLENQL EMSLKGVRMK KDQILTDEIK EQNRKGNLTY QENLKLHKKV DLLCQENAEL 180 RKKAWEERDA SEANKSSHPP YTLSNGYDLH GPIHLQLSQP QPHSNEPPPK SMKLGLQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-103	MIKC_MADS family protein