PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658302.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 1671aa MW: 182622 Da PI: 6.1147

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	763	804	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + ++t +c+++++k XP_021658302.1 763 PWTSEEREIFMDKLATFGKD-FRKIASFLD-HKTTADCVEFYYK 804 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.5	8.2e-10	977	1016	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++ +av +G++ ++tI++++ +R++ qck ++ XP_021658302.1 977 WTDEEKSIFMRAVSSYGKD-FTTISHCVR-TRSRDQCKVFFS 1016 ***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1671 aa Download sequence
MDRIAILLAG EDPTSFAGLQ GVWHLFTEES GHGYTPFRSS DRILEEKNFR PSVSRGDGKH 60 GRNGRDNRGS FGQRDWKAHS WEMSNGSPNT PGRPHDASND QSSVDDTVIY PSSHPHSEIL 120 NTWGLLHSKD QHDNSKMDVV NGMGTGQRGD RENSLDWKPL NKWTRSGSLS SRGSGFSHSS 180 SSKSLGGADS CEGKAELQHK NASLVQSPSG DAAAACVTSV PSEEMAARKK PRLNWGEGLA 240 KYEKKKVEGP EVNVSKDGVV ISSSNIEPIH SQSSNLVDKS PRAMGLSDCA SPATPSSVTC 300 SSPLVEEKTF GKGINADNDV SNLCGSPCVG SQSHIEGFSF NLDVLNATSI ANLGSALVEL 360 LQSDDSSSVD SSFVKSTALN KLLIWKGGIS KALEVTESEI DLLENELKSL KFETGSRCPC 420 PAAASCFLAG DESKLCSEQA ASSNDIPRPS SLQVSSCGAG HVEKIPICNG VLEIVHGGRK 480 DDDVDSPGTA TSKFVESASM VMAVSSSDLM RQDECSDDMG VIQTPNMVLK SVVPCSNRQD 540 IDEPAHRDVN LLTESKEGAS FPSDVIIAEN NLCHLILTAN KESATRASQV FINLLPRDQF 600 NVDFSEVANV AFWQNDPLVK ERFVMRKRFL KFKERVVTLK FKAFQHLWKE DMRFLSIRKY 660 RAKTQKKYEL SMRTTHSGHK KNRSSIRSRF SPGGNLSLVT TTEMLNFTSK VLQVSQVEQY 720 RNALKMPALI LDKKERMVSR FISRNGLIED PCVVEKERAM INPWTSEERE IFMDKLATFG 780 KDFRKIASFL DHKTTADCVE FYYKNHKSDC FEKTKKSTQA KSSTNYLVAS GKNWNREMNA 840 ASLDILGAAS VIAADADNSM GNQRVCSGRF YLGGYSDSKT SHADDRILDR SSSFDILENE 900 RETVAADVLA GICGSVSSEA MSSCITTSVD PVEGCREWKS QKVDSVRKRP STSDITQNVD 960 EETCSYESCG EMDPADWTDE EKSIFMRAVS SYGKDFTTIS HCVRTRSRDQ CKVFFSKARK 1020 CLGLDSVHPG PENVRTPVSD DANGGGSDTE DGADESGSVI CSEKLCSKTD DNLPVMNAKQ 1080 HEESDALEMK NLTTDLNRSK DSNVAGLLGP KVEKTFVSDV CKMENKPELA FDNRNKIMDG 1140 FVHQSESVLA SEVSNESVGS EAGIEKPIED DIAVGDAVDP RTSNPVAAAD VKAIAEASAN 1200 GSVNHYLNTQ SDLVQDSNDS RNFSHQPLGM GSCSNFILCV ENMPHVSVEF DSVDKSPIVS 1260 SLQENKLATS NSVLQDTAAI QCRKLHNQDR LSSQLDIQEH RDEQGKKSVS GDDHSQHLAA 1320 QSLVNHNESS QILGAYPLQI TTKREMNGNI PCRPHSELQS LSMSDRNAAN QFVAQDCYLQ 1380 KCSNSKAQHP VSELPLLSQH TGQGNDHSGD QSQSSSEVEK PCRNGDVKLF GKILSNPSSS 1440 PKLNPSIIEN VEQGTQSSKT VSKSSTLKFS GHQTTDGSSS VLKFDRNNYL GPENVPMKSY 1500 GFWDGNNIQT GFSSVPEYFL AKYPAAFGNY RVTSSKMEQQ ALQAPVKCND RNLNSVSVLP 1560 PREISSSNGV VDYQMYMSHD ISKVKSFSVD MKQRHDIFSE LQRNGFEAIS SLQQQGRGIG 1620 MNVVGRGGIL VGGSGTGISA PVAALKMHYS GKNGSMMREE ESWNNRGDIG R

Sequence ? help Back to Top

Protein Sequence Length: 1671 aa Download sequence

MDRIAILLAG EDPTSFAGLQ GVWHLFTEES GHGYTPFRSS DRILEEKNFR PSVSRGDGKH  60
GRNGRDNRGS FGQRDWKAHS WEMSNGSPNT PGRPHDASND QSSVDDTVIY PSSHPHSEIL  120
NTWGLLHSKD QHDNSKMDVV NGMGTGQRGD RENSLDWKPL NKWTRSGSLS SRGSGFSHSS  180
SSKSLGGADS CEGKAELQHK NASLVQSPSG DAAAACVTSV PSEEMAARKK PRLNWGEGLA  240
KYEKKKVEGP EVNVSKDGVV ISSSNIEPIH SQSSNLVDKS PRAMGLSDCA SPATPSSVTC  300
SSPLVEEKTF GKGINADNDV SNLCGSPCVG SQSHIEGFSF NLDVLNATSI ANLGSALVEL  360
LQSDDSSSVD SSFVKSTALN KLLIWKGGIS KALEVTESEI DLLENELKSL KFETGSRCPC  420
PAAASCFLAG DESKLCSEQA ASSNDIPRPS SLQVSSCGAG HVEKIPICNG VLEIVHGGRK  480
DDDVDSPGTA TSKFVESASM VMAVSSSDLM RQDECSDDMG VIQTPNMVLK SVVPCSNRQD  540
IDEPAHRDVN LLTESKEGAS FPSDVIIAEN NLCHLILTAN KESATRASQV FINLLPRDQF  600
NVDFSEVANV AFWQNDPLVK ERFVMRKRFL KFKERVVTLK FKAFQHLWKE DMRFLSIRKY  660
RAKTQKKYEL SMRTTHSGHK KNRSSIRSRF SPGGNLSLVT TTEMLNFTSK VLQVSQVEQY  720
RNALKMPALI LDKKERMVSR FISRNGLIED PCVVEKERAM INPWTSEERE IFMDKLATFG  780
KDFRKIASFL DHKTTADCVE FYYKNHKSDC FEKTKKSTQA KSSTNYLVAS GKNWNREMNA  840
ASLDILGAAS VIAADADNSM GNQRVCSGRF YLGGYSDSKT SHADDRILDR SSSFDILENE  900
RETVAADVLA GICGSVSSEA MSSCITTSVD PVEGCREWKS QKVDSVRKRP STSDITQNVD  960
EETCSYESCG EMDPADWTDE EKSIFMRAVS SYGKDFTTIS HCVRTRSRDQ CKVFFSKARK  1020
CLGLDSVHPG PENVRTPVSD DANGGGSDTE DGADESGSVI CSEKLCSKTD DNLPVMNAKQ  1080
HEESDALEMK NLTTDLNRSK DSNVAGLLGP KVEKTFVSDV CKMENKPELA FDNRNKIMDG  1140
FVHQSESVLA SEVSNESVGS EAGIEKPIED DIAVGDAVDP RTSNPVAAAD VKAIAEASAN  1200
GSVNHYLNTQ SDLVQDSNDS RNFSHQPLGM GSCSNFILCV ENMPHVSVEF DSVDKSPIVS  1260
SLQENKLATS NSVLQDTAAI QCRKLHNQDR LSSQLDIQEH RDEQGKKSVS GDDHSQHLAA  1320
QSLVNHNESS QILGAYPLQI TTKREMNGNI PCRPHSELQS LSMSDRNAAN QFVAQDCYLQ  1380
KCSNSKAQHP VSELPLLSQH TGQGNDHSGD QSQSSSEVEK PCRNGDVKLF GKILSNPSSS  1440
PKLNPSIIEN VEQGTQSSKT VSKSSTLKFS GHQTTDGSSS VLKFDRNNYL GPENVPMKSY  1500
GFWDGNNIQT GFSSVPEYFL AKYPAAFGNY RVTSSKMEQQ ALQAPVKCND RNLNSVSVLP  1560
PREISSSNGV VDYQMYMSHD ISKVKSFSVD MKQRHDIFSE LQRNGFEAIS SLQQQGRGIG  1620
MNVVGRGGIL VGGSGTGISA PVAALKMHYS GKNGSMMREE ESWNNRGDIG R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein