PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658301.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 1709aa MW: 187675 Da PI: 6.4939

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	801	842	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + ++t +c+++++k XP_021658301.1 801 PWTSEEREIFMDKLATFGKD-FRKIASFLD-HKTTADCVEFYYK 842 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.5	8.4e-10	1015	1054	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++ +av +G++ ++tI++++ +R++ qck ++ XP_021658301.1 1015 WTDEEKSIFMRAVSSYGKD-FTTISHCVR-TRSRDQCKVFFS 1054 ***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1709 aa Download sequence
MPQERLSWDR KEFLKERKYD RPKARWRESS SSHYGSYRDF ARWGGSNEFR RPPGHVKQGV 60 WHLFTEESGH GYTPFRSSDR ILEEKNFRPS VSRGDGKHGR NGRDNRGSFG QRDWKAHSWE 120 MSNGSPNTPG RPHDASNDQS SVDDTVIYPS SHPHSEILNT WGLLHSKDQH DNSKMDVVNG 180 MGTGQRGDRE NSLDWKPLNK WTRSGSLSSR GSGFSHSSSS KSLGGADSCE GKAELQHKNA 240 SLVQSPSGDA AAACVTSVPS EEMAARKKPR LNWGEGLAKY EKKKVEGPEV NVSKDGVVIS 300 SSNIEPIHSQ SSNLVDKSPR AMGLSDCASP ATPSSVTCSS PLVEEKTFGK GINADNDVSN 360 LCGSPCVGSQ SHIEGFSFNL DVLNATSIAN LGSALVELLQ SDDSSSVDSS FVKSTALNKL 420 LIWKGGISKA LEVTESEIDL LENELKSLKF ETGSRCPCPA AASCFLAGDE SKLCSEQAAS 480 SNDIPRPSSL QVSSCGAGHV EKIPICNGVL EIVHGGRKDD DVDSPGTATS KFVESASMVM 540 AVSSSDLMRQ DECSDDMGVI QTPNMVLKSV VPCSNRQDID EPAHRDVNLL TESKEGASFP 600 SDVIIAENNL CHLILTANKE SATRASQVFI NLLPRDQFNV DFSEVANVAF WQNDPLVKER 660 FVMRKRFLKF KERVVTLKFK AFQHLWKEDM RFLSIRKYRA KTQKKYELSM RTTHSGHKKN 720 RSSIRSRFSP GGNLSLVTTT EMLNFTSKVL QVSQVEQYRN ALKMPALILD KKERMVSRFI 780 SRNGLIEDPC VVEKERAMIN PWTSEEREIF MDKLATFGKD FRKIASFLDH KTTADCVEFY 840 YKNHKSDCFE KTKKSTQAKS STNYLVASGK NWNREMNAAS LDILGAASVI AADADNSMGN 900 QRVCSGRFYL GGYSDSKTSH ADDRILDRSS SFDILENERE TVAADVLAGI CGSVSSEAMS 960 SCITTSVDPV EGCREWKSQK VDSVRKRPST SDITQNVDEE TCSYESCGEM DPADWTDEEK 1020 SIFMRAVSSY GKDFTTISHC VRTRSRDQCK VFFSKARKCL GLDSVHPGPE NVRTPVSDDA 1080 NGGGSDTEDG ADESGSVICS EKLCSKTDDN LPVMNAKQHE ESDALEMKNL TTDLNRSKDS 1140 NVAGLLGPKV EKTFVSDVCK MENKPELAFD NRNKIMDGFV HQSESVLASE VSNESVGSEA 1200 GIEKPIEDDI AVGDAVDPRT SNPVAAADVK AIAEASANGS VNHYLNTQSD LVQDSNDSRN 1260 FSHQPLGMGS CSNFILCVEN MPHVSVEFDS VDKSPIVSSL QENKLATSNS VLQDTAAIQC 1320 RKLHNQDRLS SQLDIQEHRD EQGKKSVSGD DHSQHLAAQS LVNHNESSQI LGAYPLQITT 1380 KREMNGNIPC RPHSELQSLS MSDRNAANQF VAQDCYLQKC SNSKAQHPVS ELPLLSQHTG 1440 QGNDHSGDQS QSSSEVEKPC RNGDVKLFGK ILSNPSSSPK LNPSIIENVE QGTQSSKTVS 1500 KSSTLKFSGH QTTDGSSSVL KFDRNNYLGP ENVPMKSYGF WDGNNIQTGF SSVPEYFLAK 1560 YPAAFGNYRV TSSKMEQQAL QAPVKCNDRN LNSVSVLPPR EISSSNGVVD YQMYMSHDIS 1620 KVKSFSVDMK QRHDIFSELQ RNGFEAISSL QQQGRGIGMN VVGRGGILVG GSGTGISAPV 1680 AALKMHYSGK NGSMMREEES WNNRGDIGR

Sequence ? help Back to Top

Protein Sequence Length: 1709 aa Download sequence

MPQERLSWDR KEFLKERKYD RPKARWRESS SSHYGSYRDF ARWGGSNEFR RPPGHVKQGV  60
WHLFTEESGH GYTPFRSSDR ILEEKNFRPS VSRGDGKHGR NGRDNRGSFG QRDWKAHSWE  120
MSNGSPNTPG RPHDASNDQS SVDDTVIYPS SHPHSEILNT WGLLHSKDQH DNSKMDVVNG  180
MGTGQRGDRE NSLDWKPLNK WTRSGSLSSR GSGFSHSSSS KSLGGADSCE GKAELQHKNA  240
SLVQSPSGDA AAACVTSVPS EEMAARKKPR LNWGEGLAKY EKKKVEGPEV NVSKDGVVIS  300
SSNIEPIHSQ SSNLVDKSPR AMGLSDCASP ATPSSVTCSS PLVEEKTFGK GINADNDVSN  360
LCGSPCVGSQ SHIEGFSFNL DVLNATSIAN LGSALVELLQ SDDSSSVDSS FVKSTALNKL  420
LIWKGGISKA LEVTESEIDL LENELKSLKF ETGSRCPCPA AASCFLAGDE SKLCSEQAAS  480
SNDIPRPSSL QVSSCGAGHV EKIPICNGVL EIVHGGRKDD DVDSPGTATS KFVESASMVM  540
AVSSSDLMRQ DECSDDMGVI QTPNMVLKSV VPCSNRQDID EPAHRDVNLL TESKEGASFP  600
SDVIIAENNL CHLILTANKE SATRASQVFI NLLPRDQFNV DFSEVANVAF WQNDPLVKER  660
FVMRKRFLKF KERVVTLKFK AFQHLWKEDM RFLSIRKYRA KTQKKYELSM RTTHSGHKKN  720
RSSIRSRFSP GGNLSLVTTT EMLNFTSKVL QVSQVEQYRN ALKMPALILD KKERMVSRFI  780
SRNGLIEDPC VVEKERAMIN PWTSEEREIF MDKLATFGKD FRKIASFLDH KTTADCVEFY  840
YKNHKSDCFE KTKKSTQAKS STNYLVASGK NWNREMNAAS LDILGAASVI AADADNSMGN  900
QRVCSGRFYL GGYSDSKTSH ADDRILDRSS SFDILENERE TVAADVLAGI CGSVSSEAMS  960
SCITTSVDPV EGCREWKSQK VDSVRKRPST SDITQNVDEE TCSYESCGEM DPADWTDEEK  1020
SIFMRAVSSY GKDFTTISHC VRTRSRDQCK VFFSKARKCL GLDSVHPGPE NVRTPVSDDA  1080
NGGGSDTEDG ADESGSVICS EKLCSKTDDN LPVMNAKQHE ESDALEMKNL TTDLNRSKDS  1140
NVAGLLGPKV EKTFVSDVCK MENKPELAFD NRNKIMDGFV HQSESVLASE VSNESVGSEA  1200
GIEKPIEDDI AVGDAVDPRT SNPVAAADVK AIAEASANGS VNHYLNTQSD LVQDSNDSRN  1260
FSHQPLGMGS CSNFILCVEN MPHVSVEFDS VDKSPIVSSL QENKLATSNS VLQDTAAIQC  1320
RKLHNQDRLS SQLDIQEHRD EQGKKSVSGD DHSQHLAAQS LVNHNESSQI LGAYPLQITT  1380
KREMNGNIPC RPHSELQSLS MSDRNAANQF VAQDCYLQKC SNSKAQHPVS ELPLLSQHTG  1440
QGNDHSGDQS QSSSEVEKPC RNGDVKLFGK ILSNPSSSPK LNPSIIENVE QGTQSSKTVS  1500
KSSTLKFSGH QTTDGSSSVL KFDRNNYLGP ENVPMKSYGF WDGNNIQTGF SSVPEYFLAK  1560
YPAAFGNYRV TSSKMEQQAL QAPVKCNDRN LNSVSVLPPR EISSSNGVVD YQMYMSHDIS  1620
KVKSFSVDMK QRHDIFSELQ RNGFEAISSL QQQGRGIGMN VVGRGGILVG GSGTGISAPV  1680
AALKMHYSGK NGSMMREEES WNNRGDIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein