PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656703.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 276aa MW: 31531.5 Da PI: 5.2506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++q+G g+W++ +++ g+ R++k+c++rw +yl XP_021656703.1 14 KGPWTPEEDQILINYIQQYGHGNWRALPKHAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.2	1.4e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_021656703.1 67 RGNFTREEEDTIIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDQILINYIQ QYGHGNWRAL PKHAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TREEEDTIIK LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKQNP 120 VGIPEIKRRS IDMISRVDQE SKTEPELVNL SNLVGFESRE GIEYRPISPQ QCSSSEISSV 180 TTGDDAINNM SSMKVEPSDD FLEMDENFWS EVLSSDNSSS ESDILGAAQF QIPFSTLGNA 240 MEPAVQYGYN SSMYDSMEFW YNLFTRTGGS LELPEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	6e-81	MYB family protein