PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654758.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 364aa MW: 40631 Da PI: 7.6044

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v +G g+W++++++ g++R++k+c++rw +yl XP_021654758.1 14 RGLWTAEEDAKILAYVSNHGIGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	51.4	2.5e-16	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T++E+el+++++k G++ W++Iar ++ gRt++++k++w++ XP_021654758.1 68 DNFTPQEEELIINLHKAIGSR-WSLIARQLP-GRTDNDVKNYWNT 110 68*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRPPCCDKS NVKRGLWTAE EDAKILAYVS NHGIGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDNF TPQEEELIIN LHKAIGSRWS LIARQLPGRT DNDVKNYWNT KLRKKLYKMG 120 IDPVTHKPFS QILSDYGNIR GISNNTGNDF ASFNKNFNSN LTSKPEQPSS SVLTGPSSSN 180 VILRPPIEQV QENSFTNNSR SWELLPQFHV TNHDILQPHL INVVSSSCSS SSSSSTTVTQ 240 LNSPQSYTCQ QSQTPITPSS PSLWSEFLLS DPGMSLDFQQ QQQKQDSHGA LSSTSTQNDI 300 SHDKFTGGNE DFGPYDHGII NGNQTNSHVD AYSSSASSFV AGILDKDREM RSQFPQLLDP 360 SFDY

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRPPCCDKS NVKRGLWTAE EDAKILAYVS NHGIGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDNF TPQEEELIIN LHKAIGSRWS LIARQLPGRT DNDVKNYWNT KLRKKLYKMG  120
IDPVTHKPFS QILSDYGNIR GISNNTGNDF ASFNKNFNSN LTSKPEQPSS SVLTGPSSSN  180
VILRPPIEQV QENSFTNNSR SWELLPQFHV TNHDILQPHL INVVSSSCSS SSSSSTTVTQ  240
LNSPQSYTCQ QSQTPITPSS PSLWSEFLLS DPGMSLDFQQ QQQKQDSHGA LSSTSTQNDI  300
SHDKFTGGNE DFGPYDHGII NGNQTNSHVD AYSSSASSFV AGILDKDREM RSQFPQLLDP  360
SFDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	2e-86	MYB family protein