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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021654758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 364aa MW: 40631 Da PI: 7.6044 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v +G g+W++++++ g++R++k+c++rw +yl XP_021654758.1 14 RGLWTAEEDAKILAYVSNHGIGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.5e-16 | 68 | 110 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T++E+el+++++k G++ W++Iar ++ gRt++++k++w++ XP_021654758.1 68 DNFTPQEEELIINLHKAIGSR-WSLIARQLP-GRTDNDVKNYWNT 110 68*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MGRPPCCDKS NVKRGLWTAE EDAKILAYVS NHGIGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDNF TPQEEELIIN LHKAIGSRWS LIARQLPGRT DNDVKNYWNT KLRKKLYKMG 120 IDPVTHKPFS QILSDYGNIR GISNNTGNDF ASFNKNFNSN LTSKPEQPSS SVLTGPSSSN 180 VILRPPIEQV QENSFTNNSR SWELLPQFHV TNHDILQPHL INVVSSSCSS SSSSSTTVTQ 240 LNSPQSYTCQ QSQTPITPSS PSLWSEFLLS DPGMSLDFQQ QQQKQDSHGA LSSTSTQNDI 300 SHDKFTGGNE DFGPYDHGII NGNQTNSHVD AYSSSASSFV AGILDKDREM RSQFPQLLDP 360 SFDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 2e-86 | MYB family protein |