PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654022.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 221aa MW: 25487.1 Da PI: 9.7193

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	78.7	4e-25	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+EL +LCdae+ + ifss+gklye++s XP_021654022.1 10 RIDNSASRQVTFSKRRKGLIKKAKELAILCDAEIGLAIFSSSGKLYEFAS 59 8***********************************************86 PP
2	K-box	79.4	8.9e-27	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e a L+++++nLq+ +R+llGe+L +Ls+k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k + +++en +L kk+ XP_021654022.1 81 NPTSDLKFWQRETAILRQQLHNLQERHRQLLGEQLYDLSVKDLQNLENQLEMSLRGIRMKKEQILTDEIQDLGRKGNLIHQENVELCKKV 170 5678899*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELAILCD AEIGLAIFSS SGKLYEFASS 60 SMKSVIERYN KTKEEHQQLL NPTSDLKFWQ RETAILRQQL HNLQERHRQL LGEQLYDLSV 120 KDLQNLENQL EMSLRGIRMK KEQILTDEIQ DLGRKGNLIH QENVELCKKV CGTRDENATT 180 QTENSFILYG FNSYESSHIP THLQLSQPAQ PNYETPPKAT K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-102	MIKC_MADS family protein