PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021654022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 221aa    MW: 25487.1 Da    PI: 9.7193
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021654022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.74e-251059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n+  rqvtfskRr+g++KKA+EL +LCdae+ + ifss+gklye++s
  XP_021654022.1 10 RIDNSASRQVTFSKRRKGLIKKAKELAILCDAEIGLAIFSSSGKLYEFAS 59
                    8***********************************************86 PP

2K-box79.48.9e-2781170998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     + +++ + +q+e a L+++++nLq+ +R+llGe+L +Ls+k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k + +++en +L kk+
  XP_021654022.1  81 NPTSDLKFWQRETAILRQQLHNLQERHRQLLGEQLYDLSVKDLQNLENQLEMSLRGIRMKKEQILTDEIQDLGRKGNLIHQENVELCKKV 170
                     5678899*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELAILCD AEIGLAIFSS SGKLYEFASS  60
SMKSVIERYN KTKEEHQQLL NPTSDLKFWQ RETAILRQQL HNLQERHRQL LGEQLYDLSV  120
KDLQNLENQL EMSLRGIRMK KEQILTDEIQ DLGRKGNLIH QENVELCKKV CGTRDENATT  180
QTENSFILYG FNSYESSHIP THLQLSQPAQ PNYETPPKAT K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.11e-102MIKC_MADS family protein