PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021653076.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 308aa    MW: 34114.2 Da    PI: 6.9769
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021653076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.27.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+lv+++++ G g+W++ ++  g+ R++k+c++rw +yl
   XP_021653076.1 14 KGPWTPEEDEILVRYINKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP

2Myb_DNA-binding48.22.5e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
   XP_021653076.1  67 RGPFTLEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEVKNLWNTHL 112
                      89********************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRTPCCDKK GLKKGPWTPE EDEILVRYIN KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGPF TLEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEVKNLWNT HLKKRLLCMG  120
LDPQTHEPFT SCGPAIKTPA SPATRHMAQW ESARLEAEAR LSRESSLFNP PTPGKTDSDY  180
FLRMWNSEVG ESFRKFNRGD KTTCQSPASA SQASSSTKCG SFSAVTADIS PNLAGYSTTA  240
SNQNEDTECK SFKSYAEDVN AGSDSSSSVE LEDSSDSTLQ LLLDFPINND MSFLEENVDS  300
IASYSAMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-123MYB family protein