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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021653076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 308aa MW: 34114.2 Da PI: 6.9769 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 7.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+++++ G g+W++ ++ g+ R++k+c++rw +yl XP_021653076.1 14 KGPWTPEEDEILVRYINKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_021653076.1 67 RGPFTLEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEVKNLWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MGRTPCCDKK GLKKGPWTPE EDEILVRYIN KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TLEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEVKNLWNT HLKKRLLCMG 120 LDPQTHEPFT SCGPAIKTPA SPATRHMAQW ESARLEAEAR LSRESSLFNP PTPGKTDSDY 180 FLRMWNSEVG ESFRKFNRGD KTTCQSPASA SQASSSTKCG SFSAVTADIS PNLAGYSTTA 240 SNQNEDTECK SFKSYAEDVN AGSDSSSSVE LEDSSDSTLQ LLLDFPINND MSFLEENVDS 300 IASYSAMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-123 | MYB family protein |