PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652669.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 298aa    MW: 33381.1 Da    PI: 9.7789
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.65.9e-181762147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W+ Ia+++  gR++k+c++rw++ 
   XP_021652669.1 17 RGHWRPAEDEKLRQLVNQYGPQNWNFIAEHLE-GRSGKSCRLRWYNQ 62
                     899*****************************.************96 PP
2Myb_DNA-binding55.41.4e-1769113147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++T eE+e+l++a++  G++ W++Iar ++ gRt++ +k++++ +
   XP_021652669.1  69 KKPFTDEEEERLLKAHQIQGNR-WASIARLFP-GRTDNAVKNHYHVV 113
                      689*******************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MENGRGSSSD SGKSCHRGHW RPAEDEKLRQ LVNQYGPQNW NFIAEHLEGR SGKSCRLRWY  60
NQLDPNINKK PFTDEEEERL LKAHQIQGNR WASIARLFPG RTDNAVKNHY HVVMARRKRE  120
RLSSVYGKRS FHVHPTESNK KTAPGSNFES CYRPHQQLVD HSKLGFRSSV CFPMCSSSSP  180
SWTISASTIT NESLNFDFFN GKRKDYMNSS SSCSQYTKEG SHGFNGSIYS GCYQSLFGSS  240
PQISSSKKVA PNNNPLALVS YGDGGYASKS ATLLKEQGDG AIKQKDVSFI DFLGVGIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33450.18e-73MYB family protein