PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650579.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 274aa MW: 30876.7 Da PI: 6.3757

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	33	78	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++ Ed+ l ++v+q+G ++W++I++ + gR++k+c++rw + XP_021650579.1 33 KGPWSPKEDQMLQKLVQQHGARNWSLISKFIH-GRSGKSCRLRWCNQ 78 79****************************.*********985 PP
2	Myb_DNA-binding	57.6	2.9e-18	85	129	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T eEd+ +v+a++++G++ W+tIar ++ gRt++ +k++w++ XP_021650579.1 85 RRPFTLEEDKVIVNAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 129 679*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MQSSSRPFNS LSVSFFPFSV ESMDEDSAAD RVKGPWSPKE DQMLQKLVQQ HGARNWSLIS 60 KFIHGRSGKS CRLRWCNQLS PEVERRPFTL EEDKVIVNAH AKYGNKWATI ARLLNGRTDN 120 AIKNHWNSTL KRKYLTMMEE DGTIDAVHPA ANKFAKLVST SESYSPSGSD VSDAVLPITS 180 SSSEQQQNLK ETPSYQVKLE QPGEETRSIE NDEVSTELTL SLPCDESGEL ARKCREKTIM 240 FGAELLAVMK EMIRKEVRDY MTEIEKNGGF SSNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-67	MYB family protein