PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650359.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 368aa MW: 41595.4 Da PI: 5.4647

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_021650359.1 14 KGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45	2.5e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ I++ ++ gRt++++k++w++ XP_021650359.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQISAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGRHSCCLKQ KLRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QISAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPTTHKPIN EALEVKEEKN CTDKASLQIP QSKGLPIVSN STTQEPTFLI SDTTYYSNGL 180 TETSREQFMN KQAYDPLSYF EFSAGIEPGG YNSSIPGLQQ PNLRPFDQNQ FETSSNFAFT 240 SMPSLTSFDH GSMSGTDFSD NSASRMSSMF LNEAKESSSN SSNISNYTAG YQMNSMVENS 300 AAFSWEAENK IDSVFQFPVN GIKTEELRPN PWQEGQLHPQ NSIDFSSYPL TSLSEDLTGA 360 NFDVFHQI

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGRHSCCLKQ KLRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QISAQLPGRT DNEIKNFWNS CLKKKLMKQG  120
IDPTTHKPIN EALEVKEEKN CTDKASLQIP QSKGLPIVSN STTQEPTFLI SDTTYYSNGL  180
TETSREQFMN KQAYDPLSYF EFSAGIEPGG YNSSIPGLQQ PNLRPFDQNQ FETSSNFAFT  240
SMPSLTSFDH GSMSGTDFSD NSASRMSSMF LNEAKESSSN SSNISNYTAG YQMNSMVENS  300
AAFSWEAENK IDSVFQFPVN GIKTEELRPN PWQEGQLHPQ NSIDFSSYPL TSLSEDLTGA  360
NFDVFHQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	9e-83	MYB family protein