PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021649618.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 1217aa    MW: 135937 Da    PI: 6.1816
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021649618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.45e-11436480246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +WT+eEd++l+  v++ G+ +W  Ia+ +gk+Rt+ qc  r+q 
   XP_021649618.1 436 SKWTAEEDKKLLFIVQEKGMTNWLDIAASLGKNRTPFQCLARFQR 480
                      58***************************************9995 PP

2Myb_DNA-binding39.31.5e-12489532246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        WT+eEd +l  av  +G ++W ++a+t+  gRt+ qc +rw k
   XP_021649618.1 489 REWTKEEDAQLRIAVGTYGEHDWQSVASTLE-GRTGTQCSNRWKK 532
                      68*****************************.***********87 PP

3Myb_DNA-binding47.25.2e-15541585146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g+WT +E ++l+ av ++G+++W++Iar ++  Rt+ qc++rw +
   XP_021649618.1 541 KGKWTLDERKRLKVAVMLFGPRNWNKIARFVP-ERTAPQCRERWVN 585
                      79******************************.***********76 PP

4Myb_DNA-binding50.74.1e-16594638248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      ++WT+eEd++l+ a++++G   W++Ia++++  Rt+ qc+ rw  +l
   XP_021649618.1 594 DKWTEEEDLRLKAAIEEYGYC-WAKIAKCLP-PRTDSQCRRRWKVLL 638
                      69*****************99.*********.9**********9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1217 aa     Download sequence    
MSSLLQNDDA DQDLCSDDDE IDDGFNDDIE ALRRACTLTG TNLSDVNIDN GENNRSLSAE  60
GDGDSYSGEG EEDEDDFKLF RIIQNRFSFG TDSCEPIYSK PLCAFPLDFD DEEDDFETLC  120
AVRKRFSAYD NSEGKLENLA EKSEGVDASS VVSKLVTSDD SVIDRTACKV FPDTEEGLNS  180
TLLSDNMEIQ PSGYIEQQHS LDACKFSSLG RKDSSSFPKS AQVFIDAIKK NRSCQKFLRK  240
KLAHIEARIE ENKKLKERVK ILRDFQVSCK KITGRALAQG KDPRIQLIST PRISNSRDSK  300
VNDKKVSTMH NGPPENSHVA NYRMALTNFP LNLNRKNWTE AEKENLQKGI RQQFQEMVLQ  360
FSVDQLSGSE GSPGNVNDLD AVLASIREME ITPERIREFL PKVNWDQLAS LYVVGRSGAE  420
CEAKWLNSED PLINHSKWTA EEDKKLLFIV QEKGMTNWLD IAASLGKNRT PFQCLARFQR  480
SLNAHIIKRE WTKEEDAQLR IAVGTYGEHD WQSVASTLEG RTGTQCSNRW KKSIHPGNGR  540
KGKWTLDERK RLKVAVMLFG PRNWNKIARF VPERTAPQCR ERWVNSEDPS LNMDKWTEEE  600
DLRLKAAIEE YGYCWAKIAK CLPPRTDSQC RRRWKVLLPH EVPLLQAARK TQKVAIIGNF  660
VDRESERPAL GPHDFVPLPM ITSAFEPEKQ NQSRKRKRKS REGEVSGKKK NAAPGNTSKR  720
LQSKRPNEGM QISSVEDPGI TNGTEVATFG ESGMVVTKSS SSEKNPHMKT YQDIADAQDG  780
DPKKKKKLPK LPLKRNVLVE IAGNSQSCLL SHPESLELGI SNVDGLQTFG GESETSSEKR  840
KVQEQHSEAN TCTNTGEEEG SEPITDVIEL DHDHCDSNVL AVNIVDQDET VGQPDASNKE  900
VTNLSLEGKA FMELADSNCL TLPPENLEAR VTNAGGVEKS SLDGISLIKA SKAPNCTSKS  960
STELSGQCNF VVSNPCHHDG HRKSKLSKSS NKQVLEDNGK LASFCQKISK KRRLRVDKND  1020
KQILETNDED DVTLASFCRS ISKKRRVRVV KNADQTCPPS DLVSKRVYQH DYPNKMPSFM  1080
LDGEAQTCYS GGFAENVLLE EPSVVDTAKT DAPQEPMRKP ISIDHDSDLE MSDITLASLL  1140
HNKQKRKGQV LAKSRDQPHS LSRMKKRSTP LAKGVVQCCN GRMLETSSGC EIQSCGTSSI  1200
PTITGDDKEP DGQDVAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1694699RKRKRK
2694710RKRKRKSREGEVSGKKK
3695711RKRKRKSREGEVSGKKK
4782788PKKKKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.10.0MYB family protein