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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021649618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 1217aa MW: 135937 Da PI: 6.1816 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.4 | 5e-11 | 436 | 480 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eEd++l+ v++ G+ +W Ia+ +gk+Rt+ qc r+q XP_021649618.1 436 SKWTAEEDKKLLFIVQEKGMTNWLDIAASLGKNRTPFQCLARFQR 480 58***************************************9995 PP | |||||||
2 | Myb_DNA-binding | 39.3 | 1.5e-12 | 489 | 532 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd +l av +G ++W ++a+t+ gRt+ qc +rw k XP_021649618.1 489 REWTKEEDAQLRIAVGTYGEHDWQSVASTLE-GRTGTQCSNRWKK 532 68*****************************.***********87 PP | |||||||
3 | Myb_DNA-binding | 47.2 | 5.2e-15 | 541 | 585 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT +E ++l+ av ++G+++W++Iar ++ Rt+ qc++rw + XP_021649618.1 541 KGKWTLDERKRLKVAVMLFGPRNWNKIARFVP-ERTAPQCRERWVN 585 79******************************.***********76 PP | |||||||
4 | Myb_DNA-binding | 50.7 | 4.1e-16 | 594 | 638 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++WT+eEd++l+ a++++G W++Ia++++ Rt+ qc+ rw +l XP_021649618.1 594 DKWTEEEDLRLKAAIEEYGYC-WAKIAKCLP-PRTDSQCRRRWKVLL 638 69*****************99.*********.9**********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1217 aa Download sequence |
MSSLLQNDDA DQDLCSDDDE IDDGFNDDIE ALRRACTLTG TNLSDVNIDN GENNRSLSAE 60 GDGDSYSGEG EEDEDDFKLF RIIQNRFSFG TDSCEPIYSK PLCAFPLDFD DEEDDFETLC 120 AVRKRFSAYD NSEGKLENLA EKSEGVDASS VVSKLVTSDD SVIDRTACKV FPDTEEGLNS 180 TLLSDNMEIQ PSGYIEQQHS LDACKFSSLG RKDSSSFPKS AQVFIDAIKK NRSCQKFLRK 240 KLAHIEARIE ENKKLKERVK ILRDFQVSCK KITGRALAQG KDPRIQLIST PRISNSRDSK 300 VNDKKVSTMH NGPPENSHVA NYRMALTNFP LNLNRKNWTE AEKENLQKGI RQQFQEMVLQ 360 FSVDQLSGSE GSPGNVNDLD AVLASIREME ITPERIREFL PKVNWDQLAS LYVVGRSGAE 420 CEAKWLNSED PLINHSKWTA EEDKKLLFIV QEKGMTNWLD IAASLGKNRT PFQCLARFQR 480 SLNAHIIKRE WTKEEDAQLR IAVGTYGEHD WQSVASTLEG RTGTQCSNRW KKSIHPGNGR 540 KGKWTLDERK RLKVAVMLFG PRNWNKIARF VPERTAPQCR ERWVNSEDPS LNMDKWTEEE 600 DLRLKAAIEE YGYCWAKIAK CLPPRTDSQC RRRWKVLLPH EVPLLQAARK TQKVAIIGNF 660 VDRESERPAL GPHDFVPLPM ITSAFEPEKQ NQSRKRKRKS REGEVSGKKK NAAPGNTSKR 720 LQSKRPNEGM QISSVEDPGI TNGTEVATFG ESGMVVTKSS SSEKNPHMKT YQDIADAQDG 780 DPKKKKKLPK LPLKRNVLVE IAGNSQSCLL SHPESLELGI SNVDGLQTFG GESETSSEKR 840 KVQEQHSEAN TCTNTGEEEG SEPITDVIEL DHDHCDSNVL AVNIVDQDET VGQPDASNKE 900 VTNLSLEGKA FMELADSNCL TLPPENLEAR VTNAGGVEKS SLDGISLIKA SKAPNCTSKS 960 STELSGQCNF VVSNPCHHDG HRKSKLSKSS NKQVLEDNGK LASFCQKISK KRRLRVDKND 1020 KQILETNDED DVTLASFCRS ISKKRRVRVV KNADQTCPPS DLVSKRVYQH DYPNKMPSFM 1080 LDGEAQTCYS GGFAENVLLE EPSVVDTAKT DAPQEPMRKP ISIDHDSDLE MSDITLASLL 1140 HNKQKRKGQV LAKSRDQPHS LSRMKKRSTP LAKGVVQCCN GRMLETSSGC EIQSCGTSSI 1200 PTITGDDKEP DGQDVAD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 694 | 699 | RKRKRK |
2 | 694 | 710 | RKRKRKSREGEVSGKKK |
3 | 695 | 711 | RKRKRKSREGEVSGKKK |
4 | 782 | 788 | PKKKKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 0.0 | MYB family protein |