PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021649083.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24677.4 Da    PI: 9.4467
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021649083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.73.5e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRrng+lKKA+ELSvLCdaevav+ifs++g+l+e+ss
  XP_021649083.1  9 KRIENAASRQVTFSKRRNGLLKKAYELSVLCDAEVAVLIFSQRGRLFEFSS 59
                    79***********************************************96 PP

2K-box59.71.2e-2083172998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      +++  ++   e++ + k+ie+L+ +q ++lG++L+s+s++eLq++ +qLek+l++i+++K el++e+ie+l+ +e+ l een +Lr k 
  XP_021649083.1  83 DTAQRIQQQISESTEMVKKIEQLKISQGKFLGQGLTSCSVEELQEIHNQLEKGLSNIKERKAELFKEKIEQLKAQERLLLEENASLRVKC 172
                     445566777789999***********************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVRGKIQMKR IENAASRQVT FSKRRNGLLK KAYELSVLCD AEVAVLIFSQ RGRLFEFSSN  60
DMEKTIERYR RNAKDKVQAD SVDTAQRIQQ QISESTEMVK KIEQLKISQG KFLGQGLTSC  120
SVEELQEIHN QLEKGLSNIK ERKAELFKEK IEQLKAQERL LLEENASLRV KCGEKPWPHP  180
TQQKEAVTYL SLNGKNSEVE TELSIGLPEP KMHCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.32e-79MIKC_MADS family protein