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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021649083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24677.4 Da PI: 9.4467 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.7 | 3.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaevav+ifs++g+l+e+ss XP_021649083.1 9 KRIENAASRQVTFSKRRNGLLKKAYELSVLCDAEVAVLIFSQRGRLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 59.7 | 1.2e-20 | 83 | 172 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ ++ e++ + k+ie+L+ +q ++lG++L+s+s++eLq++ +qLek+l++i+++K el++e+ie+l+ +e+ l een +Lr k XP_021649083.1 83 DTAQRIQQQISESTEMVKKIEQLKISQGKFLGQGLTSCSVEELQEIHNQLEKGLSNIKERKAELFKEKIEQLKAQERLLLEENASLRVKC 172 445566777789999***********************************************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVRGKIQMKR IENAASRQVT FSKRRNGLLK KAYELSVLCD AEVAVLIFSQ RGRLFEFSSN 60 DMEKTIERYR RNAKDKVQAD SVDTAQRIQQ QISESTEMVK KIEQLKISQG KFLGQGLTSC 120 SVEELQEIHN QLEKGLSNIK ERKAELFKEK IEQLKAQERL LLEENASLRV KCGEKPWPHP 180 TQQKEAVTYL SLNGKNSEVE TELSIGLPEP KMHCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 2e-79 | MIKC_MADS family protein |