PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648604.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 383aa MW: 42547.4 Da PI: 8.7099

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1e-16	121	166	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+ + gR++k+c++rw++ XP_021648604.1 121 RGHWRPAEDAKLKELVAQYGPQNWNLIAENLE-GRSGKSCRLRWFNQ 166 899***************************.*********996 PP
2	Myb_DNA-binding	55.8	1e-17	173	216	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l a++++G++ W+ Iar ++ gRt++ +k++w+ XP_021648604.1 173 RRSFTEEEEERLFAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 216 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MSVQHLRSDN NSFSGCQNMN FLPPPAASQL YLARFGVMGK SRETETKNPQ TGFQFLSHSM 60 DQNGKPWSIQ QVENRGTKRP HDGSDGIFGI QKKDLSLNLV EEEEPKSSAP GKNGHTKLCA 120 RGHWRPAEDA KLKELVAQYG PQNWNLIAEN LEGRSGKSCR LRWFNQLDPR INRRSFTEEE 180 EERLFAAHRL YGNKWAMIAR LFPGRTDNAV KNHWHVIMAR RHREQSSIYR RRKPSSSSQI 240 APPIKGLDVN LQNNACSDST TISSTIDESA STCTDLSLSP STKAPPNLFT RFSPQGAPMG 300 SFAEKEVTMG NLDFDQFYFS RGKGFYQTGS MGVVMGQDQP GQSDSNSDVS ATESVGTTVI 360 GDNENGNGKI NMTFIDFLGV GAT

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MSVQHLRSDN NSFSGCQNMN FLPPPAASQL YLARFGVMGK SRETETKNPQ TGFQFLSHSM  60
DQNGKPWSIQ QVENRGTKRP HDGSDGIFGI QKKDLSLNLV EEEEPKSSAP GKNGHTKLCA  120
RGHWRPAEDA KLKELVAQYG PQNWNLIAEN LEGRSGKSCR LRWFNQLDPR INRRSFTEEE  180
EERLFAAHRL YGNKWAMIAR LFPGRTDNAV KNHWHVIMAR RHREQSSIYR RRKPSSSSQI  240
APPIKGLDVN LQNNACSDST TISSTIDESA STCTDLSLSP STKAPPNLFT RFSPQGAPMG  300
SFAEKEVTMG NLDFDQFYFS RGKGFYQTGS MGVVMGQDQP GQSDSNSDVS ATESVGTTVI  360
GDNENGNGKI NMTFIDFLGV GAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-72	MYB family protein