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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021648296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 317aa MW: 36024.3 Da PI: 6.5138 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 9.9e-18 | 32 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +lv++++++G g+W++ ++ g+ R++k+c++rw +yl XP_021648296.1 32 KGAWSPEEDRILVQYIQKHGHGSWRSLPKNAGLLRCGKSCRLRWTNYL 79 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.9e-17 | 85 | 130 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+ +++++ +lG++ W++Ia+ ++ gRt++++k++w+++l XP_021648296.1 85 RGPFTPEEEATIIQLHGMLGNK-WASIASQLP-GRTDNEIKNFWNTHL 130 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MTSIEKNINS QRGGEKKKMG RTYCCDNDGV KKGAWSPEED RILVQYIQKH GHGSWRSLPK 60 NAGLLRCGKS CRLRWTNYLR PDIKRGPFTP EEEATIIQLH GMLGNKWASI ASQLPGRTDN 120 EIKNFWNTHL KKRLSSLDQK LQIFSSSWGP INIKWQSPST QHMVHWESAR VEAEARLSME 180 SLLLNPSSSV KMENNYFPRI WNSEVGEPFR NVNGKDGGAC ESPILQASSW TKFGSSSVDN 240 DNEFQMMSIE QETTHEQEDN CKPNADIITG SDSISFNEFT DYSDTALKLL LDIPGGNDME 300 FLEGHTEKFY QLPQSQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-101 | MYB family protein |