PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021648296.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 317aa    MW: 36024.3 Da    PI: 6.5138
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021648296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.9e-183279148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +lv++++++G g+W++ ++  g+ R++k+c++rw +yl
   XP_021648296.1 32 KGAWSPEEDRILVQYIQKHGHGSWRSLPKNAGLLRCGKSCRLRWTNYL 79
                     79******************************99************97 PP
2Myb_DNA-binding53.45.9e-1785130148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+  +++++ +lG++ W++Ia+ ++ gRt++++k++w+++l
   XP_021648296.1  85 RGPFTPEEEATIIQLHGMLGNK-WASIASQLP-GRTDNEIKNFWNTHL 130
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MTSIEKNINS QRGGEKKKMG RTYCCDNDGV KKGAWSPEED RILVQYIQKH GHGSWRSLPK  60
NAGLLRCGKS CRLRWTNYLR PDIKRGPFTP EEEATIIQLH GMLGNKWASI ASQLPGRTDN  120
EIKNFWNTHL KKRLSSLDQK LQIFSSSWGP INIKWQSPST QHMVHWESAR VEAEARLSME  180
SLLLNPSSSV KMENNYFPRI WNSEVGEPFR NVNGKDGGAC ESPILQASSW TKFGSSSVDN  240
DNEFQMMSIE QETTHEQEDN CKPNADIITG SDSISFNEFT DYSDTALKLL LDIPGGNDME  300
FLEGHTEKFY QLPQSQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-101MYB family protein