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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021648253.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27413.4 Da PI: 9.8725 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83 | 1.9e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n + rqvtfskRr g+lKKA ELS+LCdaev viifss+ kly+y+s XP_021648253.1 10 RIDNPTSRQVTFSKRRSGLLKKARELSILCDAEVGVIIFSSNSKLYDYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 85.1 | 1.5e-28 | 77 | 171 | 6 | 99 |
K-box 6 gks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ + +++ + +q+e+a L+ke++ Lq+ +R+l+Ge+L+ Ls+k+L++Le+qLe slk +R kK+++l+e+i+el +k + een +L+kk++ XP_021648253.1 77 NQQmNPASEIKFWQREAASLRKELQYLQECHRKLMGEELSGLSVKDLKNLENQLEMSLKGVRMKKDQILTEEIKELNRKGNLSYEENLKLHKKVD 171 3334678899**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGKIAIRR IDNPTSRQVT FSKRRSGLLK KARELSILCD AEVGVIIFSS NSKLYDYAST 60 SMNSVIERYN KVREEQNQQM NPASEIKFWQ REAASLRKEL QYLQECHRKL MGEELSGLSV 120 KDLKNLENQL EMSLKGVRMK KDQILTEEIK ELNRKGNLSY EENLKLHKKV DLLCQENAEL 180 HKKAHGKRDA SEANKSSHPP YTLSNGYDLH APIHLQLSQP QPHTSESLPT SMKLGLQLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14210.1 | 1e-102 | MIKC_MADS family protein |