PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647975.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 246aa    MW: 27237.3 Da    PI: 8.3473
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.14.9e-193681147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEd +l ++v+++G+++W++I+r++  gR++k+c++rw + 
   XP_021647975.1 36 KGPWSAEEDRILTRLVERHGPRNWSLISRYIK-GRSGKSCRLRWCNQ 81
                     79*****************************9.***********985 PP

2Myb_DNA-binding55.11.8e-1790132347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ 
   XP_021647975.1  90 PFSPAEDETILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 132
                      79******************.*********.***********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEAMNVCSTS SESSSSESSF NGDSTPRNAN KQERIKGPWS AEEDRILTRL VERHGPRNWS  60
LISRYIKGRS GKSCRLRWCN QLSPNVEHRP FSPAEDETIL AAHARYGNRW ATIARLLPGR  120
TDNAVKNHWN STLKRRAREQ QHLMMMEGNI DNSNTNEGAV AAAAASGSTP RMAQAVEEEE  180
ALTALTLAPP GFGGGGGICS NSSGMEAERR GDRLPAGFWD VMRNVIAREV REYMSSTVNE  240
TTWGFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-58MYB family protein