PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647258.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 353aa MW: 40170.9 Da PI: 5.6682

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	3.8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl XP_021647258.1 14 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.6e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_021647258.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILS SSLYNSSQMN ISRLLGVQPM FHPELLRLAT SIISSQRENQ 180 NFVSQNSQEN QLCNLQDQNQ YQPIVQANQF QSPVQEMPTC SALTTPFVPF SNETQLMDAN 240 ITDLSSQNSQ MNHQEWQSDD GMASNLTDYM TQLPSYNNYY ASDQTAIMDP SSETTSTFIS 300 NNSNQNFSFA SVLSTPSSSP TPCINGSSST EDERESYCSN MLKFEIPYIL DVM

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILS SSLYNSSQMN ISRLLGVQPM FHPELLRLAT SIISSQRENQ  180
NFVSQNSQEN QLCNLQDQNQ YQPIVQANQF QSPVQEMPTC SALTTPFVPF SNETQLMDAN  240
ITDLSSQNSQ MNHQEWQSDD GMASNLTDYM TQLPSYNNYY ASDQTAIMDP SSETTSTFIS  300
NNSNQNFSFA SVLSTPSSSP TPCINGSSST EDERESYCSN MLKFEIPYIL DVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-107	MYB family protein