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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021646834.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 24801.6 Da PI: 9.5132 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.5e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021646834.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 77.1 | 4.5e-26 | 82 | 170 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + ++++++ ++++ L k+ie L+ ++R+llG++Le++s+ eLqqLe+qLe+sl++iR++Kn+l++eqie+l++ ek l een++Lr+k XP_021646834.1 82 AVQENMQNGKEDSFSLAKKIELLEISKRKLLGDELEPCSIDELQQLENQLERSLTRIRTRKNQLFREQIERLKEEEKILIEENTRLRAK 170 4567899********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MVRGRTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSC 60 SINKTIERYQ KKAKDLGISI KAVQENMQNG KEDSFSLAKK IELLEISKRK LLGDELEPCS 120 IDELQQLENQ LERSLTRIRT RKNQLFREQI ERLKEEEKIL IEENTRLRAK CGLQPLDLST 180 TQEKQQIADG ESMEVETELF IGPRPPETRT TQKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 2e-74 | MIKC_MADS family protein |