PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021646461.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 310aa    MW: 35030.1 Da    PI: 9.0863
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021646461.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.8e-092873346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE +++ +a +++ ++   +W ++a+ ++ g+t  +++  ++ 
   XP_021646461.1 28 KWTPEENKQFENALALYDKDepdRWQKVAAVIP-GKTVGDVIKQYRE 73
                     8********************************.******9999986 PP
2Myb_DNA-binding46.86.8e-15137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + +++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_021646461.1 137 PWTEEEHRQFLMGLQKYGKGDWRNISRNFVTTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDRGIEILSP ASYLQNSNWL FPETRATKWT PEENKQFENA LALYDKDEPD RWQKVAAVIP  60
GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YSSSDAFTLE WFNNNQGYDG FRHYYTPGGK  120
RTTAARSSEQ ERKKGVPWTE EEHRQFLMGL QKYGKGDWRN ISRNFVTTRT PTQVASHAQK  180
YFIRQSTGGK DKRRSSIHDI TTVNLPDTKS PSPDEKKSSP DHSTTSLQSQ PQQKMVGMAK  240
GLIDWKPQNE GGGAAGVFSQ ANGNLLMAPL CGISSYGQKL QEQNLLRGTL PGYQFAPYNL  300
IFQMQPMQRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-121MYB family protein