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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021646262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 26169.5 Da PI: 8.9657 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.1 | 2.7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRrngi+KKA+EL vLCda+v++i+fs+tgk++e++s XP_021646262.1 9 KRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEFIS 59 79***********************************************86 PP | |||||||
2 | K-box | 87.5 | 2.6e-29 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yq++ g +l+++++e++q++l+kL++ +++L+r +R+++GedL++ s+ eL+ Le++++++l+ +R++K+++l++q+++ +kk ++l+e++ +L XP_021646262.1 71 YQNTLGIDLWSTHYERMQEHLRKLREINNKLRRDIRQRMGEDLNDVSFDELRGLEERMDSALELVRERKYHVLKTQTDTRRKKVRNLDERHGDLL 165 78888999***********************************************************************************9997 PP K-box 96 kkl 98 ++ XP_021646262.1 166 LEY 168 665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGRGKIEIKR IENPTNRQVT YSKRRNGIFK KAQELTVLCD AKVSLIMFSN TGKFHEFISP 60 TTTTKTMFDQ YQNTLGIDLW STHYERMQEH LRKLREINNK LRRDIRQRMG EDLNDVSFDE 120 LRGLEERMDS ALELVRERKY HVLKTQTDTR RKKVRNLDER HGDLLLEYEA KCEDLQYGLV 180 DNEGDYESTI TLANGASNLY AFRLHHGHPT ANGGGYGSQE LRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 6e-78 | MIKC_MADS family protein |