PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645491.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 226aa MW: 25995.6 Da PI: 9.9513

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.2	9.2e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkly++ss XP_021645491.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSS 59 8***********************************************96 PP
2	K-box	86.1	7.2e-29	77	170	5	98
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ + ++ + +q+e+a L+++++nLq+++R+++Ge+L+ Ls+keLq+Le++Le sl+ +R k++++l+++i+el +k + l++en +L kk+ XP_021645491.1 77 QQMGNPISEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLSVKELQNLESRLEMSLRGVRMKRDQILMDEIQELNRKGNFLHQENVELCKKI 170 4444677889********************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVVIFSS TGKLYDFSST 60 SMKSVIERYN KSKEEHQQMG NPISEVKFWQ REAAMLRQQL QNLQENHRQM MGEELSGLSV 120 KELQNLESRL EMSLRGVRMK RDQILMDEIQ ELNRKGNFLH QENVELCKKI YGAGNINGVN 180 RDYFSTNSLG IEEESNVPVH LQLSQPQQQN YDTPARATKL GRLQLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-103	MIKC_MADS family protein