PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021641702.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 295aa    MW: 33532.8 Da    PI: 7.6938
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021641702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.4e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W+++Ed+ll+ ++k +G g W+  +r+ g++R++k+c++rw++yl
   XP_021641702.1 14 RGIWSAWEDKLLISYIKVHGEGKWTDLPRRAGLKRCGKSCRLRWLNYL 61
                     788*******************************************97 PP

2Myb_DNA-binding58.51.5e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++++Edel+++++k+lG++ W++Ia +++ gRt++++k++w++yl
   XP_021641702.1  67 RGSFSADEDELIIRLHKLLGNR-WSLIAGRLP-GRTDNDIKNYWNTYL 112
                      899*******************.*********.*************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGRKPCCVKE EVNRGIWSAW EDKLLISYIK VHGEGKWTDL PRRAGLKRCG KSCRLRWLNY  60
LRPDIKRGSF SADEDELIIR LHKLLGNRWS LIAGRLPGRT DNDIKNYWNT YLRKKVEEKK  120
INGTSASKKQ ANDFKGRKPM HNQSQLYLNN PPAATSSHRV IRTKAVRCSK VIVVPEPLCY  180
NNNNDDEAAE KKMESERPCS SSSAILHEDK CLDFDINDFL SMETPNSSVL DQSREINGWH  240
GTTEDGKCWD FPVSSAVEAE LDVLMGNSND DANLFQPSDA LDLKSISNFL GLEDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.16e-61MYB family protein