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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021641702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 295aa MW: 33532.8 Da PI: 7.6938 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.6 | 4.4e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+++Ed+ll+ ++k +G g W+ +r+ g++R++k+c++rw++yl XP_021641702.1 14 RGIWSAWEDKLLISYIKVHGEGKWTDLPRRAGLKRCGKSCRLRWLNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 58.5 | 1.5e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++Edel+++++k+lG++ W++Ia +++ gRt++++k++w++yl XP_021641702.1 67 RGSFSADEDELIIRLHKLLGNR-WSLIAGRLP-GRTDNDIKNYWNTYL 112 899*******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MGRKPCCVKE EVNRGIWSAW EDKLLISYIK VHGEGKWTDL PRRAGLKRCG KSCRLRWLNY 60 LRPDIKRGSF SADEDELIIR LHKLLGNRWS LIAGRLPGRT DNDIKNYWNT YLRKKVEEKK 120 INGTSASKKQ ANDFKGRKPM HNQSQLYLNN PPAATSSHRV IRTKAVRCSK VIVVPEPLCY 180 NNNNDDEAAE KKMESERPCS SSSAILHEDK CLDFDINDFL SMETPNSSVL DQSREINGWH 240 GTTEDGKCWD FPVSSAVEAE LDVLMGNSND DANLFQPSDA LDLKSISNFL GLEDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 6e-61 | MYB family protein |