![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021640746.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 27145.5 Da PI: 9.2481 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.2e-15 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd++l+ +v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_021640746.1 12 KGLWKPEEDLILKTYVETHGEGNWATVSEKSGLMRGGKSCRLRWKNYL 59 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.4e-17 | 65 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_021640746.1 65 RGGMSQEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 6779******************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MENKQVKPPI KKGLWKPEED LILKTYVETH GEGNWATVSE KSGLMRGGKS CRLRWKNYLR 60 PNIKRGGMSQ EEEDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKRCHTGERK 120 TTDPGNHKNG NDDKYKNKRQ RNSHPTSNTS PKSNPEELDG KKKEKEESTI SDTWIQNAQS 180 MNYYMESPTV PASSDAFVFN NDPFIACWDS FVLLELFGYN DKMYSQVDLE TFMP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 136 | 141 | KNKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52600.1 | 6e-65 | MYB family protein |