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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021640745.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 28597.3 Da PI: 9.2533 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.4e-15 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd++l+ +v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_021640745.1 12 KGLWKPEEDLILKTYVETHGEGNWATVSEKSGLMRGGKSCRLRWKNYL 59 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 1e-15 | 65 | 122 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ +W++Ia +++ gRt++++k++w+++l XP_021640745.1 65 RGGMSQEEEDLIIRMHKLLGNRwslayplfltcRWSLIAGRLP-GRTDNEVKNYWNTHL 122 6779***************************************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MENKQVKPPI KKGLWKPEED LILKTYVETH GEGNWATVSE KSGLMRGGKS CRLRWKNYLR 60 PNIKRGGMSQ EEEDLIIRMH KLLGNRWSLA YPLFLTCRWS LIAGRLPGRT DNEVKNYWNT 120 HLNKRCHTGE RKTTDPGNHK NGNDDKYKNK RQRNSHPTSN TSPKSNPEEL DGKKKEKEES 180 TISDTWIQNA QSMNYYMESP TVPASSDAFV FNNDPFIACW DSFVLLELFG YNDKMYSQVD 240 LETFMP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 153 | KNKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 4e-61 | MYB family protein |