PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640372.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 983aa MW: 110426 Da PI: 5.3838

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.6	3.1e-55	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n++k++lt+e++++p+ gsl+L+n++++r+frkDG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+n++fqr XP_021640372.1 13 QEaQRRWLKPAEVLYILQNHDKYQLTQEPPQKPTGGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNSNFQR 107 56599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r++w+L+ ++e+ivlvhy+e XP_021640372.1 108 RSFWMLDPAYEHIVLVHYRE 127 ****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
MSQSGYDINV LFQEAQRRWL KPAEVLYILQ NHDKYQLTQE PPQKPTGGSL FLFNKRVLRF 60 FRKDGHNWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNSNFQRRSF WMLDPAYEHI 120 VLVHYREIGE GKSTTGPAAQ LSPAFSSSFS PSPTSYTTQN QDSTSAISDL YDPYRNSSSP 180 SSIEVSSEIV TKDNGLDTTT EFTSSTKVEV SQYLRRLEEQ LSLNEDNIKE IDPLCNEEGV 240 TNDPELFEFE KEISKKDNSA NVPHRLEYVV NNQCYDGHDG MQLQTNNLVH LQNAGDGGEY 300 HQPYVRKYAD GSKESVSWNE VLESCEASSG LEYEEKPQPY LREPAEEHEY SRWLNFNGAN 360 VRNSSVLLPQ EVQNVEIPAY SPVLVTHETN PDYHPVLYDQ GQLEVPIEAD SSLTIAQQQK 420 FTIHEIYPEW GFTSEATKVI VVGSFLCNPS ECAWTCMFGD TEVPIEIIQE GVLRCEAPPH 480 LPGKVTFCIT SGNRESCSEV REFEYRTESS CPHCSLSQME VAKSPEELLL LVRFVQMLLS 540 DSFLQKEDSI ETGTQLLRKL KTDNDSWGTM IETLLVGNGT STGTVDWLLQ QLLKDKLQQW 600 LSSKSQERQD QPSCTLSKKE QGIIHMVAGL GYEWALSPIL SQGVNVNFRD INGWTALHWA 660 ARFGREKMVA ALLASGASAG AVTDPTSQDP VGKTPASIAA NCGHKGLAGY LSEVALTSHL 720 SSLTLEESEL SKGYAEVDAE ITVDSISKGS FAANEDQVSL KDALAAVRNA AQAAARIQAA 780 FRAHSFRKRQ QREAAVSTNN VDDYGVNSGD IPGLSAMSKL FFHNARDSNS AALSIQKKYR 840 GWKGRKDFLA FRQKVVKIQA HVRGYQVRKH YKVFCWAVGI LEKAVLRWKR KGVGLRGFRN 900 EAEPIDESED EDILKVFRKQ KVDAAIEEAV SRVLSMVNSL EARQQYRRML ERYHQAKAEL 960 VEASEGAATS LADMENEDIY HFQ

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

MSQSGYDINV LFQEAQRRWL KPAEVLYILQ NHDKYQLTQE PPQKPTGGSL FLFNKRVLRF  60
FRKDGHNWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNSNFQRRSF WMLDPAYEHI  120
VLVHYREIGE GKSTTGPAAQ LSPAFSSSFS PSPTSYTTQN QDSTSAISDL YDPYRNSSSP  180
SSIEVSSEIV TKDNGLDTTT EFTSSTKVEV SQYLRRLEEQ LSLNEDNIKE IDPLCNEEGV  240
TNDPELFEFE KEISKKDNSA NVPHRLEYVV NNQCYDGHDG MQLQTNNLVH LQNAGDGGEY  300
HQPYVRKYAD GSKESVSWNE VLESCEASSG LEYEEKPQPY LREPAEEHEY SRWLNFNGAN  360
VRNSSVLLPQ EVQNVEIPAY SPVLVTHETN PDYHPVLYDQ GQLEVPIEAD SSLTIAQQQK  420
FTIHEIYPEW GFTSEATKVI VVGSFLCNPS ECAWTCMFGD TEVPIEIIQE GVLRCEAPPH  480
LPGKVTFCIT SGNRESCSEV REFEYRTESS CPHCSLSQME VAKSPEELLL LVRFVQMLLS  540
DSFLQKEDSI ETGTQLLRKL KTDNDSWGTM IETLLVGNGT STGTVDWLLQ QLLKDKLQQW  600
LSSKSQERQD QPSCTLSKKE QGIIHMVAGL GYEWALSPIL SQGVNVNFRD INGWTALHWA  660
ARFGREKMVA ALLASGASAG AVTDPTSQDP VGKTPASIAA NCGHKGLAGY LSEVALTSHL  720
SSLTLEESEL SKGYAEVDAE ITVDSISKGS FAANEDQVSL KDALAAVRNA AQAAARIQAA  780
FRAHSFRKRQ QREAAVSTNN VDDYGVNSGD IPGLSAMSKL FFHNARDSNS AALSIQKKYR  840
GWKGRKDFLA FRQKVVKIQA HVRGYQVRKH YKVFCWAVGI LEKAVLRWKR KGVGLRGFRN  900
EAEPIDESED EDILKVFRKQ KVDAAIEEAV SRVLSMVNSL EARQQYRRML ERYHQAKAEL  960
VEASEGAATS LADMENEDIY HFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein