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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021638636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 367aa MW: 40281 Da PI: 6.6166 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W++I+++ g+ R++k+c++rw +yl XP_021638636.1 14 RGLWSPEEDEKLINYISTYGHGCWSSIPKHAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+v+++ lG++ W+ Ia++++ gRt++++k++w+ XP_021638636.1 67 RGSFSPQEAALIVELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSI PKHAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEAALIVE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLICHD 120 VPGLATFADV HNPSGGSEEA FFSLTGNPNL ILSTAQQDQH YLPSPASMLQ SFGQGDVKFN 180 QSNNYNLDLA NFTPSIIPSP LNNSSSSLDP MWALPYPPQH LDPSHEEDQI LSNGTGPHYT 240 GDHKFSQDQA IAIMTNYENQ GMLPMMPKLS EIIEGSVCCN IQSSSSSSAA SREVLIDPVA 300 RLPCFPSGSY NPHEVPTNQM EYIDAIMSSL PSSSSSSSLS AFSSGQFGAN PNNNNVNNLP 360 SSCSWNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 1e-82 | MYB family protein |