PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021638636.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 367aa    MW: 40281 Da    PI: 6.6166
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021638636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.51.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l++++  +G g+W++I+++ g+ R++k+c++rw +yl
   XP_021638636.1 14 RGLWSPEEDEKLINYISTYGHGCWSSIPKHAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP

2Myb_DNA-binding48.91.5e-1567109145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg+++++E  l+v+++  lG++ W+ Ia++++ gRt++++k++w+
   XP_021638636.1  67 RGSFSPQEAALIVELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109
                      899*******************.*********.***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSI PKHAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIVE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLICHD  120
VPGLATFADV HNPSGGSEEA FFSLTGNPNL ILSTAQQDQH YLPSPASMLQ SFGQGDVKFN  180
QSNNYNLDLA NFTPSIIPSP LNNSSSSLDP MWALPYPPQH LDPSHEEDQI LSNGTGPHYT  240
GDHKFSQDQA IAIMTNYENQ GMLPMMPKLS EIIEGSVCCN IQSSSSSSAA SREVLIDPVA  300
RLPCFPSGSY NPHEVPTNQM EYIDAIMSSL PSSSSSSSLS AFSSGQFGAN PNNNNVNNLP  360
SSCSWNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.21e-82MYB family protein