PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637158.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 890aa MW: 100849 Da PI: 7.0376

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.5e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637158.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637158.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA 180 GHAYYAGVKE PLEPGDSSTV RDHEMRLHEI NTLEWDELVM NDLNISPMPK GDKSMSFDQH 240 NQIAVNGSMN DEDAYTKPTR VQGNVQKKDS SILGTGDSSD LLVNDGLQSQ DSFGRWINDI 300 IADSAGSVDN AVPDSSISSG HDSHTSPAID QLQSSIPEQI FVITDISHTW AFSSETTKIL 360 VTGYFHEQYL HLAKFDLCCV CGDACVHAEI VQVGVYRCLV SPHSPGLVNL FLSLDGHKPI 420 SQVLNFEYRS PLRYPAVSSE DKPNWEEFKL QMRLACLLFS TSRSLSILTS KVSPANLKEA 480 KKFAQKTASI SHNWACLIKS IEENRVSFSQ AKDSLFEQSL KNMLKEWLLE RVVEGCKTTE 540 YDAQGQGVIH LCAILGYTWA VYLFSWSGLS LDFRDKHGWT ALHWAAYFGR EKMVAVLLSA 600 GAKPNLVTDP TSDHPGGCTA ADLASAKGYD GLAAYLSEKC LVAQFKDMSV AGNVSGSLQT 660 SSTDNVNAEN LSEEDLYLKD TLAAYRTVAD AAARIQVAFR EHSLKVRTKA VQFANPEDEA 720 RNIVAAMKIQ HAFRNYETRK KMAAAARIQY RFRTWKMRKE FLTMRKHAIR IQAAFRGFQV 780 RRQYCKIVWS VGVLEKAILR WRLKRRGFRG LHVDPIEVVA DERQESDVEE DFYRASRKQA 840 EERVERAVVR VQAMFRSRKA QEEYRRMKLT YNEAELEYEG LLDHDINLDG

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA  180
GHAYYAGVKE PLEPGDSSTV RDHEMRLHEI NTLEWDELVM NDLNISPMPK GDKSMSFDQH  240
NQIAVNGSMN DEDAYTKPTR VQGNVQKKDS SILGTGDSSD LLVNDGLQSQ DSFGRWINDI  300
IADSAGSVDN AVPDSSISSG HDSHTSPAID QLQSSIPEQI FVITDISHTW AFSSETTKIL  360
VTGYFHEQYL HLAKFDLCCV CGDACVHAEI VQVGVYRCLV SPHSPGLVNL FLSLDGHKPI  420
SQVLNFEYRS PLRYPAVSSE DKPNWEEFKL QMRLACLLFS TSRSLSILTS KVSPANLKEA  480
KKFAQKTASI SHNWACLIKS IEENRVSFSQ AKDSLFEQSL KNMLKEWLLE RVVEGCKTTE  540
YDAQGQGVIH LCAILGYTWA VYLFSWSGLS LDFRDKHGWT ALHWAAYFGR EKMVAVLLSA  600
GAKPNLVTDP TSDHPGGCTA ADLASAKGYD GLAAYLSEKC LVAQFKDMSV AGNVSGSLQT  660
SSTDNVNAEN LSEEDLYLKD TLAAYRTVAD AAARIQVAFR EHSLKVRTKA VQFANPEDEA  720
RNIVAAMKIQ HAFRNYETRK KMAAAARIQY RFRTWKMRKE FLTMRKHAIR IQAAFRGFQV  780
RRQYCKIVWS VGVLEKAILR WRLKRRGFRG LHVDPIEVVA DERQESDVEE DFYRASRKQA  840
EERVERAVVR VQAMFRSRKA QEEYRRMKLT YNEAELEYEG LLDHDINLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein