![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021637156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | CAMTA | ||||||||
Protein Properties | Length: 921aa MW: 104097 Da PI: 6.9084 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 161.5 | 1.6e-50 | 30 | 146 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637156.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589****************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637156.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *******************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 921 aa Download sequence |
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGAGHA 180 YYAGVKEPLE PGDSSTVRDH EMRLHEINTL EWDELVMNDL NISPMPKGDK SMSFDQHNQI 240 AVNGSMNDGI SLPAYNLSAE IPPLDNLTEP IARNNNSCLN IPEDAYTKPT RVQGNVQKKD 300 SSILGTGDSS DLLVNDGLQS QDSFGRWIND IIADSAGSVD NAVPDSSISS GHDSHTSPAI 360 DQLQSSIPEQ IFVITDISHT WAFSSETTKI LVTGYFHEQY LHLAKFDLCC VCGDACVHAE 420 IVQVGVYRCL VSPHSPGLVN LFLSLDGHKP ISQVLNFEYR SPLRYPAVSS EDKPNWEEFK 480 LQMRLACLLF STSRSLSILT SKVSPANLKE AKKFAQKTAS ISHNWACLIK SIEENRVSFS 540 QAKDSLFEQS LKNMLKEWLL ERVVEGCKTT EYDAQGQGVI HLCAILGYTW AVYLFSWSGL 600 SLDFRDKHGW TALHWAAYFG REKMVAVLLS AGAKPNLVTD PTSDHPGGCT AADLASAKGY 660 DGLAAYLSEK CLVAQFKDMS VAGNVSGSLQ TSSTDNVNAE NLSEEDLYLK DTLAAYRTVA 720 DAAARIQVAF REHSLKVRTK AVQFANPEDE ARNIVAAMKI QHAFRNYETR KKMAAAARIQ 780 YRFRTWKMRK EFLTMRKHAI RIQAAFRGFQ VRRQYCKIVW SVGVLEKAIL RWRLKRRGFR 840 GLHVDPIEVV ADERQESDVE EDFYRASRKQ AEERVERAVV RVQAMFRSRK AQEEYRRMKL 900 TYNEAELEYE GLLDHDINLD G |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 72 | 88 | RKKLRNFRKDGHNWKKK |
2 | 72 | 89 | RKKLRNFRKDGHNWKKKK |
3 | 73 | 89 | RKKLRNFRKDGHNWKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | CAMTA family protein |