PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637154.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 924aa MW: 104466 Da PI: 6.9084

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.6e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637154.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637154.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 924 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA 180 GHAYYAGVKE PLEPGDSSTV RDHEMRLHEI NTLEWDELVM NDLNISPMPK GDKSMSFDQH 240 NQIAVNGSMN DGISLPAYNL SAEIPPLDNL TEPIARNNNS CLNIPEDAYT KPTRVQGNVQ 300 KKDSSILGTG DSSDLLVNDG LQSQDSFGRW INDIIADSAG SVDNAVPDSS ISSGHDSHTS 360 PAIDQLQSSI PEQIFVITDI SHTWAFSSET TKILVTGYFH EQYLHLAKFD LCCVCGDACV 420 HAEIVQVGVY RCLVSPHSPG LVNLFLSLDG HKPISQVLNF EYRSPLRYPA VSSEDKPNWE 480 EFKLQMRLAC LLFSTSRSLS ILTSKVSPAN LKEAKKFAQK TASISHNWAC LIKSIEENRV 540 SFSQAKDSLF EQSLKNMLKE WLLERVVEGC KTTEYDAQGQ GVIHLCAILG YTWAVYLFSW 600 SGLSLDFRDK HGWTALHWAA YFGREKMVAV LLSAGAKPNL VTDPTSDHPG GCTAADLASA 660 KGYDGLAAYL SEKCLVAQFK DMSVAGNVSG SLQTSSTDNV NAENLSEEDL YLKDTLAAYR 720 TVADAAARIQ VAFREHSLKV RTKAVQFANP EDEARNIVAA MKIQHAFRNY ETRKKMAAAA 780 RIQYRFRTWK MRKEFLTMRK HAIRIQAAFR GFQVRRQYCK IVWSVGVLEK AILRWRLKRR 840 GFRGLHVDPI EVVADERQES DVEEDFYRAS RKQAEERVER AVVRVQAMFR SRKAQEEYRR 900 MKLTYNEAEL EYEGLLDHDI NLDG

Sequence ? help Back to Top

Protein Sequence Length: 924 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA  180
GHAYYAGVKE PLEPGDSSTV RDHEMRLHEI NTLEWDELVM NDLNISPMPK GDKSMSFDQH  240
NQIAVNGSMN DGISLPAYNL SAEIPPLDNL TEPIARNNNS CLNIPEDAYT KPTRVQGNVQ  300
KKDSSILGTG DSSDLLVNDG LQSQDSFGRW INDIIADSAG SVDNAVPDSS ISSGHDSHTS  360
PAIDQLQSSI PEQIFVITDI SHTWAFSSET TKILVTGYFH EQYLHLAKFD LCCVCGDACV  420
HAEIVQVGVY RCLVSPHSPG LVNLFLSLDG HKPISQVLNF EYRSPLRYPA VSSEDKPNWE  480
EFKLQMRLAC LLFSTSRSLS ILTSKVSPAN LKEAKKFAQK TASISHNWAC LIKSIEENRV  540
SFSQAKDSLF EQSLKNMLKE WLLERVVEGC KTTEYDAQGQ GVIHLCAILG YTWAVYLFSW  600
SGLSLDFRDK HGWTALHWAA YFGREKMVAV LLSAGAKPNL VTDPTSDHPG GCTAADLASA  660
KGYDGLAAYL SEKCLVAQFK DMSVAGNVSG SLQTSSTDNV NAENLSEEDL YLKDTLAAYR  720
TVADAAARIQ VAFREHSLKV RTKAVQFANP EDEARNIVAA MKIQHAFRNY ETRKKMAAAA  780
RIQYRFRTWK MRKEFLTMRK HAIRIQAAFR GFQVRRQYCK IVWSVGVLEK AILRWRLKRR  840
GFRGLHVDPI EVVADERQES DVEEDFYRAS RKQAEERVER AVVRVQAMFR SRKAQEEYRR  900
MKLTYNEAEL EYEGLLDHDI NLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein