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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | CAMTA | ||||||||
Protein Properties | Length: 925aa MW: 104517 Da PI: 6.8499 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 161.5 | 1.6e-50 | 30 | 146 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637152.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589****************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637152.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *******************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 925 aa Download sequence |
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGAGHA 180 YYAGVKEPLG DFTEPGDSST VRDHEMRLHE INTLEWDELV MNDLNISPMP KGDKSMSFDQ 240 HNQIAVNGSM NDGISLPAYN LSAEIPPLDN LTEPIARNNN SCLNIPEDAY TKPTRVQGNV 300 QKKDSSILGT GDSSDLLVND GLQSQDSFGR WINDIIADSA GSVDNAVPDS SISSGHDSHT 360 SPAIDQLQSS IPEQIFVITD ISHTWAFSSE TTKILVTGYF HEQYLHLAKF DLCCVCGDAC 420 VHAEIVQVGV YRCLVSPHSP GLVNLFLSLD GHKPISQVLN FEYRSPLRYP AVSSEDKPNW 480 EEFKLQMRLA CLLFSTSRSL SILTSKVSPA NLKEAKKFAQ KTASISHNWA CLIKSIEENR 540 VSFSQAKDSL FEQSLKNMLK EWLLERVVEG CKTTEYDAQG QGVIHLCAIL GYTWAVYLFS 600 WSGLSLDFRD KHGWTALHWA AYFGREKMVA VLLSAGAKPN LVTDPTSDHP GGCTAADLAS 660 AKGYDGLAAY LSEKCLVAQF KDMSVAGNVS GSLQTSSTDN VNAENLSEED LYLKDTLAAY 720 RTVADAAARI QVAFREHSLK VRTKAVQFAN PEDEARNIVA AMKIQHAFRN YETRKKMAAA 780 ARIQYRFRTW KMRKEFLTMR KHAIRIQAAF RGFQVRRQYC KIVWSVGVLE KAILRWRLKR 840 RGFRGLHVDP IEVVADERQE SDVEEDFYRA SRKQAEERVE RAVVRVQAMF RSRKAQEEYR 900 RMKLTYNEAE LEYEGLLDHD INLDG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 88 | RKKLRNFRKDGHNWKKK |
2 | 72 | 89 | RKKLRNFRKDGHNWKKKK |
3 | 73 | 89 | RKKLRNFRKDGHNWKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | CAMTA family protein |