PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637152.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 925aa MW: 104517 Da PI: 6.8499

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.6e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637152.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637152.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 925 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGAGHA 180 YYAGVKEPLG DFTEPGDSST VRDHEMRLHE INTLEWDELV MNDLNISPMP KGDKSMSFDQ 240 HNQIAVNGSM NDGISLPAYN LSAEIPPLDN LTEPIARNNN SCLNIPEDAY TKPTRVQGNV 300 QKKDSSILGT GDSSDLLVND GLQSQDSFGR WINDIIADSA GSVDNAVPDS SISSGHDSHT 360 SPAIDQLQSS IPEQIFVITD ISHTWAFSSE TTKILVTGYF HEQYLHLAKF DLCCVCGDAC 420 VHAEIVQVGV YRCLVSPHSP GLVNLFLSLD GHKPISQVLN FEYRSPLRYP AVSSEDKPNW 480 EEFKLQMRLA CLLFSTSRSL SILTSKVSPA NLKEAKKFAQ KTASISHNWA CLIKSIEENR 540 VSFSQAKDSL FEQSLKNMLK EWLLERVVEG CKTTEYDAQG QGVIHLCAIL GYTWAVYLFS 600 WSGLSLDFRD KHGWTALHWA AYFGREKMVA VLLSAGAKPN LVTDPTSDHP GGCTAADLAS 660 AKGYDGLAAY LSEKCLVAQF KDMSVAGNVS GSLQTSSTDN VNAENLSEED LYLKDTLAAY 720 RTVADAAARI QVAFREHSLK VRTKAVQFAN PEDEARNIVA AMKIQHAFRN YETRKKMAAA 780 ARIQYRFRTW KMRKEFLTMR KHAIRIQAAF RGFQVRRQYC KIVWSVGVLE KAILRWRLKR 840 RGFRGLHVDP IEVVADERQE SDVEEDFYRA SRKQAEERVE RAVVRVQAMF RSRKAQEEYR 900 RMKLTYNEAE LEYEGLLDHD INLDG

Sequence ? help Back to Top

Protein Sequence Length: 925 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQEGSP VTPMNSNSSS VSDQSPWLLS EEFDSGAGHA  180
YYAGVKEPLG DFTEPGDSST VRDHEMRLHE INTLEWDELV MNDLNISPMP KGDKSMSFDQ  240
HNQIAVNGSM NDGISLPAYN LSAEIPPLDN LTEPIARNNN SCLNIPEDAY TKPTRVQGNV  300
QKKDSSILGT GDSSDLLVND GLQSQDSFGR WINDIIADSA GSVDNAVPDS SISSGHDSHT  360
SPAIDQLQSS IPEQIFVITD ISHTWAFSSE TTKILVTGYF HEQYLHLAKF DLCCVCGDAC  420
VHAEIVQVGV YRCLVSPHSP GLVNLFLSLD GHKPISQVLN FEYRSPLRYP AVSSEDKPNW  480
EEFKLQMRLA CLLFSTSRSL SILTSKVSPA NLKEAKKFAQ KTASISHNWA CLIKSIEENR  540
VSFSQAKDSL FEQSLKNMLK EWLLERVVEG CKTTEYDAQG QGVIHLCAIL GYTWAVYLFS  600
WSGLSLDFRD KHGWTALHWA AYFGREKMVA VLLSAGAKPN LVTDPTSDHP GGCTAADLAS  660
AKGYDGLAAY LSEKCLVAQF KDMSVAGNVS GSLQTSSTDN VNAENLSEED LYLKDTLAAY  720
RTVADAAARI QVAFREHSLK VRTKAVQFAN PEDEARNIVA AMKIQHAFRN YETRKKMAAA  780
ARIQYRFRTW KMRKEFLTMR KHAIRIQAAF RGFQVRRQYC KIVWSVGVLE KAILRWRLKR  840
RGFRGLHVDP IEVVADERQE SDVEEDFYRA SRKQAEERVE RAVVRVQAMF RSRKAQEEYR  900
RMKLTYNEAE LEYEGLLDHD INLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein