PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637150.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 928aa MW: 104886 Da PI: 6.8499

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.5	1.6e-50	30	146	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl+++ei+aiL n++ + + ++ + pksg + L++rkk+r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_021637150.1 30 EEaSSRWLRPNEIHAILCNYKYFVINVKPVHLPKSGVIKLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 124 55589**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le+ivlvhy+e++ XP_021637150.1 125 RCYWLLDKTLEHIVLVHYRETQ 146 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 928 aa Download sequence
MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH 60 LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP 120 TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA 180 GHAYYAGVKE PLGDFTEPGD SSTVRDHEMR LHEINTLEWD ELVMNDLNIS PMPKGDKSMS 240 FDQHNQIAVN GSMNDGISLP AYNLSAEIPP LDNLTEPIAR NNNSCLNIPE DAYTKPTRVQ 300 GNVQKKDSSI LGTGDSSDLL VNDGLQSQDS FGRWINDIIA DSAGSVDNAV PDSSISSGHD 360 SHTSPAIDQL QSSIPEQIFV ITDISHTWAF SSETTKILVT GYFHEQYLHL AKFDLCCVCG 420 DACVHAEIVQ VGVYRCLVSP HSPGLVNLFL SLDGHKPISQ VLNFEYRSPL RYPAVSSEDK 480 PNWEEFKLQM RLACLLFSTS RSLSILTSKV SPANLKEAKK FAQKTASISH NWACLIKSIE 540 ENRVSFSQAK DSLFEQSLKN MLKEWLLERV VEGCKTTEYD AQGQGVIHLC AILGYTWAVY 600 LFSWSGLSLD FRDKHGWTAL HWAAYFGREK MVAVLLSAGA KPNLVTDPTS DHPGGCTAAD 660 LASAKGYDGL AAYLSEKCLV AQFKDMSVAG NVSGSLQTSS TDNVNAENLS EEDLYLKDTL 720 AAYRTVADAA ARIQVAFREH SLKVRTKAVQ FANPEDEARN IVAAMKIQHA FRNYETRKKM 780 AAAARIQYRF RTWKMRKEFL TMRKHAIRIQ AAFRGFQVRR QYCKIVWSVG VLEKAILRWR 840 LKRRGFRGLH VDPIEVVADE RQESDVEEDF YRASRKQAEE RVERAVVRVQ AMFRSRKAQE 900 EYRRMKLTYN EAELEYEGLL DHDINLDG

Sequence ? help Back to Top

Protein Sequence Length: 928 aa Download sequence

MESGVPGQLV GSEIHGFHTL QDLDYGNITE EASSRWLRPN EIHAILCNYK YFVINVKPVH  60
LPKSGVIKLF DRKKLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQEQLQ GSPVTPMNSN SSSVSDQSPW LLSEEFDSGA  180
GHAYYAGVKE PLGDFTEPGD SSTVRDHEMR LHEINTLEWD ELVMNDLNIS PMPKGDKSMS  240
FDQHNQIAVN GSMNDGISLP AYNLSAEIPP LDNLTEPIAR NNNSCLNIPE DAYTKPTRVQ  300
GNVQKKDSSI LGTGDSSDLL VNDGLQSQDS FGRWINDIIA DSAGSVDNAV PDSSISSGHD  360
SHTSPAIDQL QSSIPEQIFV ITDISHTWAF SSETTKILVT GYFHEQYLHL AKFDLCCVCG  420
DACVHAEIVQ VGVYRCLVSP HSPGLVNLFL SLDGHKPISQ VLNFEYRSPL RYPAVSSEDK  480
PNWEEFKLQM RLACLLFSTS RSLSILTSKV SPANLKEAKK FAQKTASISH NWACLIKSIE  540
ENRVSFSQAK DSLFEQSLKN MLKEWLLERV VEGCKTTEYD AQGQGVIHLC AILGYTWAVY  600
LFSWSGLSLD FRDKHGWTAL HWAAYFGREK MVAVLLSAGA KPNLVTDPTS DHPGGCTAAD  660
LASAKGYDGL AAYLSEKCLV AQFKDMSVAG NVSGSLQTSS TDNVNAENLS EEDLYLKDTL  720
AAYRTVADAA ARIQVAFREH SLKVRTKAVQ FANPEDEARN IVAAMKIQHA FRNYETRKKM  780
AAAARIQYRF RTWKMRKEFL TMRKHAIRIQ AAFRGFQVRR QYCKIVWSVG VLEKAILRWR  840
LKRRGFRGLH VDPIEVVADE RQESDVEEDF YRASRKQAEE RVERAVVRVQ AMFRSRKAQE  900
EYRRMKLTYN EAELEYEGLL DHDINLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	88	RKKLRNFRKDGHNWKKK
2	72	89	RKKLRNFRKDGHNWKKKK
3	73	89	RKKLRNFRKDGHNWKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein