PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637060.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 369aa MW: 40923.7 Da PI: 6.5523

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	1.9e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l +++ G g+W++ ++ g+ R++k+c++rw +yl XP_021637060.1 14 KGRWTAEEDEILTKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.1	1.5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ Tt+E+e +v++++ lG++ W+ Ia+ ++ gRt++++k++w+++l XP_021637060.1 67 RGNITTQEEETIVKLHRALGNR-WSMIAAQLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGRAPCCEKV GLKKGRWTAE EDEILTKYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TTQEEETIVK LHRALGNRWS MIAAQLPGRT DNEIKNYWNS HLRRKIYSFS 120 KKDSISSSTI TSIDIANIAG LRKSISGRSG RSAIKKRKGN TPISVAKPKS ETLTEVVPEP 180 ASSPNNASTV QIEQSNQRMG LAPENSTSEP ENTKKYLCNN GVQGSSCKDG DERFNAAGVC 240 PKKDGEIEVW GPYEWLDSEI NLLKYVLQGK AVDPSGNDII DTLNKEREEN GVLGGSEGRG 300 NEVMGPDRVA ANDQEKESSS TASAAWELYN CGSSPFDEEW YNLSFDWDSK GGVDYALREL 360 WDEGEKIMS

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGRAPCCEKV GLKKGRWTAE EDEILTKYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TTQEEETIVK LHRALGNRWS MIAAQLPGRT DNEIKNYWNS HLRRKIYSFS  120
KKDSISSSTI TSIDIANIAG LRKSISGRSG RSAIKKRKGN TPISVAKPKS ETLTEVVPEP  180
ASSPNNASTV QIEQSNQRMG LAPENSTSEP ENTKKYLCNN GVQGSSCKDG DERFNAAGVC  240
PKKDGEIEVW GPYEWLDSEI NLLKYVLQGK AVDPSGNDII DTLNKEREEN GVLGGSEGRG  300
NEVMGPDRVA ANDQEKESSS TASAAWELYN CGSSPFDEEW YNLSFDWDSK GGVDYALREL  360
WDEGEKIMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	4e-73	MYB family protein