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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | CAMTA | ||||||||
Protein Properties | Length: 845aa MW: 95132.6 Da PI: 6.9194 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 125.3 | 2.6e-39 | 1 | 79 | 40 | 118 |
CG-1 40 iLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 +L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+e+nptf rrcywlL+++le+ivlvhy+e++ XP_021637035.1 1 MLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVRRCYWLLDKTLEHIVLVHYRETQ 79 69**************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 845 aa Download sequence |
MLFDRKKLRN FRKDGHNWKK KNDGKTVKEA HEHLKVGNEE RIHVYYAHGE DNPTFVRRCY 60 WLLDKTLEHI VLVHYRETQE GSPVTPMNSN SSSVSDQSPW LLSEEFDSGV GHAYHVGEKE 120 ALEPGDSLTV INHVMRIHEI NTLEWDDLVM NNPRNSLIPK GDKITSFDQR NQVAVNGSLN 180 DGISLPAYNL SAEIPPLDNL SEPVANKNSH LNIPEDAYSP STRVQVNSNV HRKDSSIIGT 240 GDSLDLLVND GLQCQDSFGG WINCTIADSP GSIDNAVLES SISSGHDSYT SPEIDQLQSS 300 VPEQIFVITD TSHAWAYSTE MTKILLTGYF HEQYLHLAKS NLCCVCGDAC VRAEIVQAGV 360 YRCLVSPHSP GIVNLFLSLD GLIPISQVLN FEYRAALCYP VASSEDKPNW EEFKLQMRLA 420 YLLFSTSRTL NILTSKVSPA NLNEAKMFSH KTSSISHMWA YFIKSIEDGR FSFAQAKDGL 480 FELSLKNMIK EWLLERVVEG CKITEYDAQG QGVIHLCAIL GYTWAVYLFS SSALSLDFRD 540 KHGWTALHWA SYYGREKMVA VLLSAGAKPN LVTDPTSENP GGCTAADLAS AKGYDGLAGY 600 LSEKSLVAHF KDMSIAGNVS GSLRTSATDT VNSENLSEEE LYLKDTLAAY RTAADAAARI 660 QVAFGEHSLK VRTKAVQLTN PEDEAQIIVA AMKIQHSFRN YETRKKMAAA AHIQYRFRSW 720 KMQKEFLNIR EHAIKIQAAF RGFQVRRQCR KIVWSVGVLE KAILRWRLKR RGFRGLRVDP 780 AEVVAEDMQE SNAEEDFYHD SRKQAEKRVE KAVVRVQAMF RSKKAQEEYR RMKLTHNQAE 840 LCDLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 5 | 21 | RKKLRNFRKDGHNWKKK |
2 | 6 | 22 | RKKLRNFRKDGHNWKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | CAMTA family protein |