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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | CAMTA | ||||||||
Protein Properties | Length: 968aa MW: 109708 Da PI: 7.4265 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 160.5 | 3.1e-50 | 87 | 202 | 4 | 118 |
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rw +++ei aiL n++ + + ++ + pksg ++L++rkk+r+frkDG++wkkk dgktv+E+he+LKvg+ e +++yYah+e+nptf rr XP_021637033.1 87 EaRTRWFRPNEIQAILCNYKYFLINVKPVHLPKSGDIMLFDRKKLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVRR 181 4499******************************************************************************************* PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_021637033.1 182 CYWLLDKTLEHIVLVHYRETQ 202 ******************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 968 aa Download sequence |
MSFPVYFIQL GLYSFVYYLL FVGRTNAAIK TTHFPCLSPH CNCNWLTIYL QETFSHFQQK 60 LPFRFPSLPL RQLGNCNYLD FGNTREEART RWFRPNEIQA ILCNYKYFLI NVKPVHLPKS 120 GDIMLFDRKK LRNFRKDGHN WKKKNDGKTV KEAHEHLKVG NEERIHVYYA HGEDNPTFVR 180 RCYWLLDKTL EHIVLVHYRE TQEGSPVTPM NSNSSSVSDQ SPWLLSEEFD SGVGHAYHVG 240 EKEALEPGDS LTVINHVMRI HEINTLEWDD LVMNNPRNSL IPKGDKITSF DQRNQVAVNG 300 SLNDGISLPA YNLSAEIPPL DNLSEPVANK NSHLNIPEDA YSPSTRVQVN SNVHRKDSSI 360 IGTGDSLDLL VNDGLQCQDS FGGWINCTIA DSPGSIDNAV LESSISSGHD SYTSPEIDQL 420 QSSVPEQIFV ITDTSHAWAY STEMTKILLT GYFHEQYLHL AKSNLCCVCG DACVRAEIVQ 480 AGVYRCLVSP HSPGIVNLFL SLDGLIPISQ VLNFEYRAAL CYPVASSEDK PNWEEFKLQM 540 RLAYLLFSTS RTLNILTSKV SPANLNEAKM FSHKTSSISH MWAYFIKSIE DGRFSFAQAK 600 DGLFELSLKN MIKEWLLERV VEGCKITEYD AQGQGVIHLC AILGYTWAVY LFSSSALSLD 660 FRDKHGWTAL HWASYYGREK MVAVLLSAGA KPNLVTDPTS ENPGGCTAAD LASAKGYDGL 720 AGYLSEKSLV AHFKDMSIAG NVSGSLRTSA TDTVNSENLS EEELYLKDTL AAYRTAADAA 780 ARIQVAFGEH SLKVRTKAVQ LTNPEDEAQI IVAAMKIQHS FRNYETRKKM AAAAHIQYRF 840 RSWKMQKEFL NIREHAIKIQ AAFRGFQVRR QCRKIVWSVG VLEKAILRWR LKRRGFRGLR 900 VDPAEVVAED MQESNAEEDF YHDSRKQAEK RVEKAVVRVQ AMFRSKKAQE EYRRMKLTHN 960 QAELCDLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 144 | RKKLRNFRKDGHNWKKK |
2 | 129 | 145 | RKKLRNFRKDGHNWKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16150.1 | 0.0 | CAMTA family protein |