PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020697450.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

CAMTA

Protein Properties

Length: 1032aa MW: 116484 Da PI: 5.9681

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020697450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.7	3.6e-56	18	134	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL+nf+ ++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK ++v+vl+cyYah+een++fqr XP_020697450.1 18 LEAQQRWLRPVEICEILQNFRAFRIAPEPPQKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKADSVDVLHCYYAHGEENENFQR 112 5569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +ivlvhylevk XP_020697450.1 113 RTYWMLEEALMHIVLVHYLEVK 134 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1032 aa Download sequence
MAETRRLSRQ FDIEQLLLEA QQRWLRPVEI CEILQNFRAF RIAPEPPQKP PSGSLFLFDR 60 KVLRYFRKDG HNWRKKKDGK TVKEAHERLK ADSVDVLHCY YAHGEENENF QRRTYWMLEE 120 ALMHIVLVHY LEVKGSKGGF NRVKDDDDIA SATRMDSPVC SDSFTGQSHL PSQTMEIGSP 180 NSTQTSVYAD AESDNHHGRS RYHPFVELQQ YVEGPQGDVN FSNTNAPLPS QSSQYEYQEL 240 PSQSKSGCLS VAQENMTKLF NGAGHDLQFN KARTLYNATS WEEVIGNEVD GFQRAFKTIV 300 TVPGNISGQD DLEFHELLPD DLISNQKEAA NDQNKANSQI LDSEGSLVLF KTASQNDLSL 360 NGKMNGPSLL KQASLDLSNV GGDGLKKYDS FSRWMSKELG EVDDSHMKSS SQSYWNFIES 420 ENVEDSSMTT AEHLDSYTMS PSVSQDQLFS ILDFSPNWAF TGFETKVLIT GTFLKDRKDL 480 ENCKWSCMFG EVEVPAEIIA GGVLRCDTPL HKSGTVPFYI TCSNRLACSE VREFEFRDNY 540 PQCMDTTDSH SHINELYLHV RLGKLLSLGY SDQSTPVDNM TEEKINLSYK ISSLLMDSDD 600 EWLNMLETTS GEEFCADSSK DRVLQTLLKE QLHDWLLRKI AEGGKGPCVL DKEGQGVLHL 660 AAAVGYDWAI KPTITAGVGI NFRDVRGWTA LHWAAFCGRE RTVVSLVTLG AASGALTDPT 720 PEFPSGRTPA DLASANGHKG IAGFLAESSL TAHLETLTLK NTDNVVISEV TCTKDMEDFV 780 EKYDVNAPGE PSMKDSLTAV RKATLAAARI HQVFRVQSFQ RKKLLQYNEE MSGISDKQAL 840 SRISIKANTT GEHNTPAHVA AIRIQNKFRG WKGRKEFLII RKRIVKIQAH IRGHQVRKRY 900 KKIVWTVGIM EKVILRWRRK GSGLRGFRSE GLLEGSSGQE AQPQKEEDYD FLQEGRKQAE 960 ARMQKALSRV KSMVQYPEAR DQYSRLLNVV SELQKSNMLQ DRSSHEVDDV NNGDFMMEFE 1020 ELWEEDSNIP AS

Sequence ? help Back to Top

Protein Sequence Length: 1032 aa Download sequence

MAETRRLSRQ FDIEQLLLEA QQRWLRPVEI CEILQNFRAF RIAPEPPQKP PSGSLFLFDR  60
KVLRYFRKDG HNWRKKKDGK TVKEAHERLK ADSVDVLHCY YAHGEENENF QRRTYWMLEE  120
ALMHIVLVHY LEVKGSKGGF NRVKDDDDIA SATRMDSPVC SDSFTGQSHL PSQTMEIGSP  180
NSTQTSVYAD AESDNHHGRS RYHPFVELQQ YVEGPQGDVN FSNTNAPLPS QSSQYEYQEL  240
PSQSKSGCLS VAQENMTKLF NGAGHDLQFN KARTLYNATS WEEVIGNEVD GFQRAFKTIV  300
TVPGNISGQD DLEFHELLPD DLISNQKEAA NDQNKANSQI LDSEGSLVLF KTASQNDLSL  360
NGKMNGPSLL KQASLDLSNV GGDGLKKYDS FSRWMSKELG EVDDSHMKSS SQSYWNFIES  420
ENVEDSSMTT AEHLDSYTMS PSVSQDQLFS ILDFSPNWAF TGFETKVLIT GTFLKDRKDL  480
ENCKWSCMFG EVEVPAEIIA GGVLRCDTPL HKSGTVPFYI TCSNRLACSE VREFEFRDNY  540
PQCMDTTDSH SHINELYLHV RLGKLLSLGY SDQSTPVDNM TEEKINLSYK ISSLLMDSDD  600
EWLNMLETTS GEEFCADSSK DRVLQTLLKE QLHDWLLRKI AEGGKGPCVL DKEGQGVLHL  660
AAAVGYDWAI KPTITAGVGI NFRDVRGWTA LHWAAFCGRE RTVVSLVTLG AASGALTDPT  720
PEFPSGRTPA DLASANGHKG IAGFLAESSL TAHLETLTLK NTDNVVISEV TCTKDMEDFV  780
EKYDVNAPGE PSMKDSLTAV RKATLAAARI HQVFRVQSFQ RKKLLQYNEE MSGISDKQAL  840
SRISIKANTT GEHNTPAHVA AIRIQNKFRG WKGRKEFLII RKRIVKIQAH IRGHQVRKRY  900
KKIVWTVGIM EKVILRWRRK GSGLRGFRSE GLLEGSSGQE AQPQKEEDYD FLQEGRKQAE  960
ARMQKALSRV KSMVQYPEAR DQYSRLLNVV SELQKSNMLQ DRSSHEVDDV NNGDFMMEFE  1020
ELWEEDSNIP AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein