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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020695980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 396aa MW: 43793.9 Da PI: 6.6806 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98 | 6e-31 | 179 | 237 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_020695980.1 179 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 237 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MCDYFNRRME KSQGDLADIV RNRGLISPPE SANELLGAAN SWQFLPEPSA VFPRLDDKVF 60 GGDSLADAAD PLLHELARTS FFDSTEASGV QKKMLWEEGN RPNGSLLARM PQISLGKGKG 120 SPVIGPPQLL APGGGGPVEI SSPRLIAGIK RRKSQAKKVV CIPAPAAASG RPSGEVVPSD 180 LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPNMLVITY TSEHNHPWPT 240 QRNALAGSTR SHPSKTNNAS STSRSSLHNH KQFTDMKEEP KECSSSNNSS LHVKEEAHEE 300 KEKALTDHQD HNDFDSVFDE SSFNEQMMSN LNQPDNFFAD LAELDPDPMN IIFPKGFMGD 360 KLEEERDNNN NSKAMDPFIM FDWGEGNIFG EAKRGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 3e-68 | WRKY family protein |