PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693695.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 366aa    MW: 40329.1 Da    PI: 6.9446
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.7e-31163221259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
  XP_020693695.1 163 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSDHNHP 221
                     699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MCDYFWKRLE NSQGDLTDIF QGSRGAALAG SAVAADIPTT ITDHTWQPSP DPATALPLQN  60
NCFLDNFANI KDPMLHELAG TGFFGSSEKT APSNNLSSMA ITVIRQPPPL VGLTDTMKVG  120
GDVAISLPQT PAVKRRKNQA RKVVCIPAPA VASNKPGGEV VPSDLWAWRK YGQKPIKGSP  180
YPRGYYRCSS SKGCSARKQV ERSRTDPNML VITYTSDHNH PWPTQRNALA GSTRSQSSKN  240
NNNNASSSKS SSINQKLPSE SITVREEEEE EEAKLISPIS SSFPFVKERK DMENSTVVEH  300
LHHDFNQVFF HKSLKELEPD DFFADLAVLD ADSMSLDEEK NDKKTMDPFN MFGWDGGNSF  360
GVTKRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.18e-62WRKY family protein