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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020693551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | LBD | ||||||||
Protein Properties | Length: 277aa MW: 31153.6 Da PI: 4.3652 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.5 | 2.5e-39 | 22 | 120 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC++dC+lap fpa+++++f nvh+lFG+sn+lk+lk++++++r++am+s+++++++ra+dP G++++i +lq++++ ++ael+ XP_020693551.1 22 ACAACKFQRRKCTSDCTLAPFFPADKQSQFLNVHRLFGVSNILKILKSIEPDRRQEAMNSIIFQSNVRAQDPAGGCYRIIVDLQRRINAAQAELQ 116 7********************************************************************************************99 PP DUF260 96 llke 99 + + XP_020693551.1 117 FVLR 120 8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MNPLTPESDL SYSIPTASAC TACAACKFQR RKCTSDCTLA PFFPADKQSQ FLNVHRLFGV 60 SNILKILKSI EPDRRQEAMN SIIFQSNVRA QDPAGGCYRI IVDLQRRINA AQAELQFVLR 120 QIASFRAQFD ASSDIQPNLL LSQQQHQYYN DHYFSCDGQQ DLHDFHEHNL IGIDINTINA 180 DEELTQEQIL SIQQKAEGEE DVDERPPLDM SEMGRHAFGI SADYEDVESK VNVGSTVMAL 240 SSSDIEVEAK TIEQGEENDL KRAASFFTLT NYDTSDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 1e-37 | LBD family protein |