PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686252.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family CAMTA
Protein Properties Length: 806aa    MW: 89893.9 Da    PI: 5.0493
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686252.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1174.12e-54101253118
            CG-1   3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                     + k+rwl+++ei +iL n++++++t ++++ p+ gsl++++rk +ryfrkDG++wkkkkdgktvrE+hekLK g++++l+cyYah+e++ +fqrr
  XP_020686252.2  10 EAKSRWLRPTEISTILRNYRRFNITPDPPNLPPGGSLFIFDRKALRYFRKDGHQWKKKKDGKTVREAHEKLKAGSIDILHCYYAHGEDDDNFQRR 104
                     459******************************************************************************************** PP

            CG-1  98 cywlLeeelekivlvhylevk 118
                     cywlL+ +le+ivlvhy++vk
  XP_020686252.2 105 CYWLLDGQLEHIVLVHYRDVK 125
                     ******************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 806 aa     Download sequence    
MADMRQILAE AKSRWLRPTE ISTILRNYRR FNITPDPPNL PPGGSLFIFD RKALRYFRKD  60
GHQWKKKKDG KTVREAHEKL KAGSIDILHC YYAHGEDDDN FQRRCYWLLD GQLEHIVLVH  120
YRDVKEETSS SDPQLLSKGP TSQGAETSSV ADSAHINAST FVNPSSYAPI TTNVNWSMPI  180
ASSEFEGVDL GNDLTGVPFV KSVPGSGLQV ASLPGNSITG PISALTGSSL PPYTAGSMNT  240
ERLNRSINHF FLNQVTSLNL IPDEGQNVQG TSHAAGSFGF QFNDENSPST RSGSHSLKQK  300
LTDTAEQNFS LQQLSCTDAL STRSRDSIAQ NEERIKFSLH DDFNVLPEPY SQPLTVDDII  360
QVEEENAGVA DHSVEDCVSN DSVQRYEIFH DNQLDLAPPS DLNEQEEKVP TVFKNSLGMD  420
IYDNDPGGSF ERWMDKELGN DCSDILMASD SCSNWNAIDT QNDKVFSGLS RHIQLDVDSV  480
TPLLSQEQLF SIDDFSPDWA YSGDETKVLI SGVFLGGVQP SSIKWCCMFG EVEVSAQVLT  540
TNAIRCQAPP HSPGRVPFYI TCSNRLACSE VREFEYRENP TGTAISESLK NESEDEMYLQ  600
IRFAKMLSLG SDKKRLLCST ENCAKCIVKK SLAHMLIDDE PGWEKIEKET KTCQGHLWNL  660
RDALLEKLLK GRLYEWLVCK LHEDGKGPNI LDDKGQGAIH LAAALGYEWA MTSIISAGVN  720
PSFRDARGRT ALHWAAYYGR VANYLAIWAI IGVVSLICLF RAFGFCQFKT HVSAYQNYST  780
TLFFLKEYSL FIFSLKDGSI QLLVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-69CAMTA family protein