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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020686252.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | CAMTA | ||||||||
Protein Properties | Length: 806aa MW: 89893.9 Da PI: 5.0493 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 174.1 | 2e-54 | 10 | 125 | 3 | 118 |
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + k+rwl+++ei +iL n++++++t ++++ p+ gsl++++rk +ryfrkDG++wkkkkdgktvrE+hekLK g++++l+cyYah+e++ +fqrr XP_020686252.2 10 EAKSRWLRPTEISTILRNYRRFNITPDPPNLPPGGSLFIFDRKALRYFRKDGHQWKKKKDGKTVREAHEKLKAGSIDILHCYYAHGEDDDNFQRR 104 459******************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+ +le+ivlvhy++vk XP_020686252.2 105 CYWLLDGQLEHIVLVHYRDVK 125 ******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 806 aa Download sequence |
MADMRQILAE AKSRWLRPTE ISTILRNYRR FNITPDPPNL PPGGSLFIFD RKALRYFRKD 60 GHQWKKKKDG KTVREAHEKL KAGSIDILHC YYAHGEDDDN FQRRCYWLLD GQLEHIVLVH 120 YRDVKEETSS SDPQLLSKGP TSQGAETSSV ADSAHINAST FVNPSSYAPI TTNVNWSMPI 180 ASSEFEGVDL GNDLTGVPFV KSVPGSGLQV ASLPGNSITG PISALTGSSL PPYTAGSMNT 240 ERLNRSINHF FLNQVTSLNL IPDEGQNVQG TSHAAGSFGF QFNDENSPST RSGSHSLKQK 300 LTDTAEQNFS LQQLSCTDAL STRSRDSIAQ NEERIKFSLH DDFNVLPEPY SQPLTVDDII 360 QVEEENAGVA DHSVEDCVSN DSVQRYEIFH DNQLDLAPPS DLNEQEEKVP TVFKNSLGMD 420 IYDNDPGGSF ERWMDKELGN DCSDILMASD SCSNWNAIDT QNDKVFSGLS RHIQLDVDSV 480 TPLLSQEQLF SIDDFSPDWA YSGDETKVLI SGVFLGGVQP SSIKWCCMFG EVEVSAQVLT 540 TNAIRCQAPP HSPGRVPFYI TCSNRLACSE VREFEYRENP TGTAISESLK NESEDEMYLQ 600 IRFAKMLSLG SDKKRLLCST ENCAKCIVKK SLAHMLIDDE PGWEKIEKET KTCQGHLWNL 660 RDALLEKLLK GRLYEWLVCK LHEDGKGPNI LDDKGQGAIH LAAALGYEWA MTSIISAGVN 720 PSFRDARGRT ALHWAAYYGR VANYLAIWAI IGVVSLICLF RAFGFCQFKT HVSAYQNYST 780 TLFFLKEYSL FIFSLKDGSI QLLVPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22300.2 | 1e-69 | CAMTA family protein |