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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020676808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | CAMTA | ||||||||
Protein Properties | Length: 162aa MW: 19157.7 Da PI: 7.8266 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 167.9 | 1.6e-52 | 32 | 144 | 5 | 117 |
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++rw +++e++aiL+n +++++ ++ ++p++gs++L++rk++r+frkDGy+wkkkkdgktv+E+hekLK+g+ e +++yYa++e++p+f rrcy XP_020676808.1 32 STRWFRPNEVHAILTNSTHFTVLPQPVENPTNGSIVLFDRKMLRNFRKDGYNWKKKKDGKTVQEAHEKLKIGNEERIHVYYARGEDDPNFYRRCY 126 89********************************************************************************************* PP CG-1 100 wlLeeelekivlvhylev 117 wlL+++le+ivlvhy+++ XP_020676808.1 127 WLLDKKLEHIVLVHYRQT 144 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MDPSLIPLAG GEVHGFRTLA DLDITKLRED ASTRWFRPNE VHAILTNSTH FTVLPQPVEN 60 PTNGSIVLFD RKMLRNFRKD GYNWKKKKDG KTVQEAHEKL KIGNEERIHV YYARGEDDPN 120 FYRRCYWLLD KKLEHIVLVH YRQTLEEEHT SSNFEDSRFM IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16940.1 | 3e-66 | CAMTA family protein |