PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674703.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 348aa    MW: 38783.6 Da    PI: 6.5005
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.21.5e-27125186159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+ed  ++++tY+g H+++
  XP_020674703.1 125 LDDGYSWRKYGQKDILGAKFPRGYYRCTYRhthGCLATKQVQRSSEDDFLFDVTYRGVHTCN 186
                     59**************************998999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MESCLVTSDM NMLINVLNQG NEHMRELQAQ LDQPFSAEAC KLLATKAKSA LSSAISLAKL  60
LEPSCQRPTG FVDSPPSASD SPKSDSSDKV FKELERREMC KKRKTLPRWS RQVRACSNSA  120
MEGPLDDGYS WRKYGQKDIL GAKFPRGYYR CTYRHTHGCL ATKQVQRSSE DDFLFDVTYR  180
GVHTCNHCLQ RTPTPSPKEE NLIQNQASKP QAHPHQQQLL EQLKTGLRVK TEGFNFDEQL  240
LESSPSFSFP STPPNCIKPH NNLFSSASMP ENQLMGNNST TTSAESNYFS LSPCGVNNFA  300
GGLNLQGFDT EIAEIISAAA STTNSPMLGM DFPMEQIEFE TDFPFGFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-45WRKY family protein