PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG002550.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 174aa MW: 19985.2 Da PI: 6.2948

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG002550.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.2	2.8e-08	119	152	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++ee+++L +++gL+ +q+ +WF N+R + TRIDC5BG002550.4 119 KWPYPTEEEKARLVQETGLQLKQINNWFINQRKR 152 569*****************************87 PP
2	ELK	30.4	8.5e-11	73	94	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC5BG002550.4 73 ELKHELKQGYREKLVDIREEIL 94 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MEAVMACWEL EQTLQSLTGA SPGEGTGATM SDDEDNPVDS ESNMFDGNDV SDGKGFGMLT 60 EGERSLVERV RQELKHELKQ GYREKLVDIR EEILRKRRAG KLPGDTASTL KAWWQAHAKW 120 PYPTEEEKAR LVQETGLQLK QINNWFINQR KRNWHSNPTS SSSDKSKRKR YDDR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	170	RKRNWHSNPTSSSSDKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	6e-94	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG002550.4