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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG013020.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 255aa MW: 29086.3 Da PI: 12.4609 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.3 | 6.4e-19 | 39 | 98 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+tkeq+ +Le l+++ r+p+ae++++ +++l ++ ++V++WFqN++a++++ TRIDC5AG013020.2 39 ARWTPTKEQVSVLEGLYRQgLRTPTAEQIQQVTARLqkhgPIEGKNVFYWFQNHKARQRQ 98 7*****************99****************99999*****************97 PP | |||||||
2 | Wus_type_Homeobox | 110.3 | 1.1e-35 | 38 | 100 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RWtPt+eQ+ +Le ly++GlrtP++e+iq++ta+L+++G ie+kNVfyWFQN+kaR+rq+q TRIDC5AG013020.2 38 NARWTPTKEQVSVLEGLYRQGLRTPTAEQIQQVTARLQKHGPIEGKNVFYWFQNHKARQRQRQ 100 78***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MESVEHQQQA AARSPPHAAA PPSPPLSPNS AAAAALANAR WTPTKEQVSV LEGLYRQGLR 60 TPTAEQIQQV TARLQKHGPI EGKNVFYWFQ NHKARQRQRQ KQQAFDYFSK QFRRPQPLPV 120 LHRPAAHPSL PPIPLHPPPH VPSATTPDPP APPACNRQGT RTLRRHMNHP PPRSFVSDVH 180 AMHPTTCRRR HRRRCCTREW RRWRMTRSRR RHRPPCTTRQ QLRTAPVLSS RARYSSLRPL 240 APTGRPTPAP AAPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 5e-23 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG013020.2 |