PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG013020.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 255aa MW: 29086.3 Da PI: 12.4609

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG013020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.3	6.4e-19	39	98	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+tkeq+ +Le l+++ r+p+ae++++ +++l ++ ++V++WFqN++a++++ TRIDC5AG013020.2 39 ARWTPTKEQVSVLEGLYRQgLRTPTAEQIQQVTARLqkhgPIEGKNVFYWFQNHKARQRQ 98 7***************99************99999***************97 PP
2	Wus_type_Homeobox	110.3	1.1e-35	38	100	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RWtPt+eQ+ +Le ly++GlrtP++e+iq++ta+L+++G ie+kNVfyWFQN+kaR+rq+q TRIDC5AG013020.2 38 NARWTPTKEQVSVLEGLYRQGLRTPTAEQIQQVTARLQKHGPIEGKNVFYWFQNHKARQRQRQ 100 78***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MESVEHQQQA AARSPPHAAA PPSPPLSPNS AAAAALANAR WTPTKEQVSV LEGLYRQGLR 60 TPTAEQIQQV TARLQKHGPI EGKNVFYWFQ NHKARQRQRQ KQQAFDYFSK QFRRPQPLPV 120 LHRPAAHPSL PPIPLHPPPH VPSATTPDPP APPACNRQGT RTLRRHMNHP PPRSFVSDVH 180 AMHPTTCRRR HRRRCCTREW RRWRMTRSRR RHRPPCTTRQ QLRTAPVLSS RARYSSLRPL 240 APTGRPTPAP AAPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	5e-23	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG013020.2