PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG013020.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 255aa    MW: 29086.3 Da    PI: 12.4609
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG013020.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.4e-193998357
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       R+t+tkeq+ +Le l+++  r+p+ae++++ +++l     ++ ++V++WFqN++a++++
  TRIDC5AG013020.2 39 ARWTPTKEQVSVLEGLYRQgLRTPTAEQIQQVTARLqkhgPIEGKNVFYWFQNHKARQRQ 98
                      7*****************99****************99999*****************97 PP

2Wus_type_Homeobox110.31.1e-3538100365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RWtPt+eQ+ +Le ly++GlrtP++e+iq++ta+L+++G ie+kNVfyWFQN+kaR+rq+q
   TRIDC5AG013020.2  38 NARWTPTKEQVSVLEGLYRQGLRTPTAEQIQQVTARLQKHGPIEGKNVFYWFQNHKARQRQRQ 100
                        78***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MESVEHQQQA AARSPPHAAA PPSPPLSPNS AAAAALANAR WTPTKEQVSV LEGLYRQGLR  60
TPTAEQIQQV TARLQKHGPI EGKNVFYWFQ NHKARQRQRQ KQQAFDYFSK QFRRPQPLPV  120
LHRPAAHPSL PPIPLHPPPH VPSATTPDPP APPACNRQGT RTLRRHMNHP PPRSFVSDVH  180
AMHPTTCRRR HRRRCCTREW RRWRMTRSRR RHRPPCTTRQ QLRTAPVLSS RARYSSLRPL  240
APTGRPTPAP AAPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.15e-23WOX family protein