PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LSD
Protein Properties Length: 175aa    MW: 19643.6 Da    PI: 9.1314
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD123.78.1e-08154175122
           zf-LSD1   1 CggCrtlLsYPrGApsVRCalC 22 
                       C+ C+ +L+YP GApsV+ a+C
  TRIDC4BG051140.1 154 CHRCQRVLAYPSGAPSVCGAMC 175
                       ********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
LACRRERSSR HGHLFSKCCH YLKDKEARYS LELATVTDLR QGLRRPRSLG VLPPLHSLFP  60
SVCHRERSPP DLQTRCPRSR TAGRKSDWAA TALRECFFKG RRYSDHSMEL LVHQGEHGPL  120
EGVRGPEAHL QILPLPKGEG NETGCTCMQS QIVCHRCQRV LAYPSGAPSV CGAMC