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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG051570.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 255aa MW: 28745.4 Da PI: 9.9033 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 39.3 | 1.1e-12 | 5 | 63 | 4 | 57 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 + +t+eql +Le l+++ r+p+aee+ + ++l ++ ++V+ WFqN+ + ++ TRIDC3AG051570.2 5 HWVPTREQLAVLEGLYRQgMRTPTAEEIHQVMARLqehgPIDGKNVFHWFQNQQVRLRQ 63 699**************99****************99999************9888775 PP | |||||||
2 | Wus_type_Homeobox | 87.9 | 1e-28 | 3 | 64 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +t W Pt eQ+ +Le ly++G+rtP++eei+++ a+L+e+G i++kNVf+WFQN++ R rq+ TRIDC3AG051570.2 3 NTHWVPTREQLAVLEGLYRQGMRTPTAEEIHQVMARLQEHGPIDGKNVFHWFQNQQVRLRQR 64 689*********************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
LVNTHWVPTR EQLAVLEGLY RQGMRTPTAE EIHQVMARLQ EHGPIDGKNV FHWFQNQQVR 60 LRQREKRQRS DYFARQFRRP HPLPVLHSPS GHPISPVQLQ APPAPNTPTC NGEAMYMQQP 120 CYMSGSAAQD TANATYYSQM QPQIMYPSAE MMAHGNVQAQ AQAAMYYQAA SPNNSNTQQL 180 RILQCPPAAG SYGAPDAYSH RPVLLNLFPQ YPTFANRRKT RRVGSVGSVR PSTSGSISWE 240 TESPKIPNRH IAIDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 8e-24 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG051570.2 |