PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG051570.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 288aa    MW: 31973.1 Da    PI: 10.0513
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG051570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.63.3e-163999357
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHH.HHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNr.Rakekk 57
                       R+ +t+eq+ +Le l+++  r+p+a+e+ + +++l     ++ ++V++WFqNr R+k+k+
  TRIDC3AG051570.1 39 ARWVPTREQIAVLEGLYRQgMRTPTAKEIHQVTARLqehgPIEGKNVFYWFQNRlRQKQKQ 99
                      7*****************99****************99999*************9999996 PP

2Wus_type_Homeobox93.71.6e-303899365
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++RW Pt eQi +Le ly++G+rtP+++ei+++ta+L+e+G ie+kNVfyWFQNr  R++qkq
   TRIDC3AG051570.1 38 NARWVPTREQIAVLEGLYRQGMRTPTAKEIHQVTARLQEHGPIEGKNVFYWFQNR-LRQKQKQ 99
                       78****************************************************7.5777775 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MENAEHHDGA ITILSLSPPP TSAPLSPPIS PNSAALANAR WVPTREQIAV LEGLYRQGMR  60
TPTAKEIHQV TARLQEHGPI EGKNVFYWFQ NRLRQKQKQQ QRSDYFARQL RRPQPLPTLR  120
RTPGHAFSPV QLQAPPAPNT PACNGEAMYM QQPCYMSGSA AQDTANATYY SQMQPQIMYP  180
SAEMMAHGNV QAQAQAAMYY QAASPNNSNT QQLRILQCPP AAGSYGAPDA YSHRPVLLNL  240
FPQYPTFANR RKTRRVGSVG SVRPSTSGSI SWETESPKIP NRHIAIDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.13e-21WOX family protein