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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG051570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 288aa MW: 31973.1 Da PI: 10.0513 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 50.6 | 3.3e-16 | 39 | 99 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHH.HHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNr.Rakekk 57 R+ +t+eq+ +Le l+++ r+p+a+e+ + +++l ++ ++V++WFqNr R+k+k+ TRIDC3AG051570.1 39 ARWVPTREQIAVLEGLYRQgMRTPTAKEIHQVTARLqehgPIEGKNVFYWFQNRlRQKQKQ 99 7*****************99****************99999*************9999996 PP | |||||||
2 | Wus_type_Homeobox | 93.7 | 1.6e-30 | 38 | 99 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW Pt eQi +Le ly++G+rtP+++ei+++ta+L+e+G ie+kNVfyWFQNr R++qkq TRIDC3AG051570.1 38 NARWVPTREQIAVLEGLYRQGMRTPTAKEIHQVTARLQEHGPIEGKNVFYWFQNR-LRQKQKQ 99 78****************************************************7.5777775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MENAEHHDGA ITILSLSPPP TSAPLSPPIS PNSAALANAR WVPTREQIAV LEGLYRQGMR 60 TPTAKEIHQV TARLQEHGPI EGKNVFYWFQ NRLRQKQKQQ QRSDYFARQL RRPQPLPTLR 120 RTPGHAFSPV QLQAPPAPNT PACNGEAMYM QQPCYMSGSA AQDTANATYY SQMQPQIMYP 180 SAEMMAHGNV QAQAQAAMYY QAASPNNSNT QQLRILQCPP AAGSYGAPDA YSHRPVLLNL 240 FPQYPTFANR RKTRRVGSVG SVRPSTSGSI SWETESPKIP NRHIAIDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 3e-21 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG051570.1 |