PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG014670.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 259aa    MW: 27889 Da    PI: 11.2759
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG014670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.11.9e-152282257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      r+R+t+++eq+ +Le+ F++   +p ++e  ++ k l     + +++V++WFqNrR + ++
  TRIDC2BG014670.1 22 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 82
                      89*****************99*************************************997 PP

2Wus_type_Homeobox107.48.9e-352184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q
   TRIDC2BG014670.1 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 84
                       589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
RPIVSMDGGG NSPDLQPAEP VRSRWTPKPE QILILESIFN SGMVNPPKDE TVRIRKLLER  60
FGAVGDANVF YWFQNRRSRS RRRQRQLQAQ AQAQAQAQAQ AASSTSLGLF AHGGAAYSSS  120
SSSSSWPPSP PSVGMVGDMD QCGGGDDLFA ISRQMGYADG GGGSGSSSFS AAAAQQQQLY  180
YSCQPATSKA KRGMRNGHHG VHQRSGDGGA TGPDGPALHV RARRDARPLQ RRPPPRRRLR  240
RAHAELADGR ELLPGQYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17810.14e-36WOX family protein