PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC2AG072250.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 154aa MW: 16897.5 Da PI: 10.961

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG072250.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.5	1.5e-20	68	127	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++++eq+++Le+l++ r+p+ +++e+++++l +++ ++V++WFqN++a+e++ TRIDC2AG072250.1 68 TRWNPSAEQIKVLEALYRGgMRTPNSAQIERITEELgrhgRIEGKNVFYWFQNHKARERQ 127 8***************99************************************97 PP
2	Wus_type_Homeobox	116.1	1.7e-37	67	129	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +tRW+P++eQik+Le+ly+ G+rtPn+++i+rit+eL ++G+ie+kNVfyWFQN+kaRerqkq TRIDC2AG072250.1 67 TTRWNPSAEQIKVLEALYRGGMRTPNSAQIERITEELGRHGRIEGKNVFYWFQNHKARERQKQ 129 69***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
SPATAPSTSP PSELFPFGAF QCLRPLAPKI SLPDQPKKLV APPDVLGRVR NATKLLSCTV 60 QVPVGGTTRW NPSAEQIKVL EALYRGGMRT PNSAQIERIT EELGRHGRIE GKNVFYWFQN 120 HKARERQKQK RAALLTLSTL DSSSLPATAT KVPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	1e-33	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG072250.1