PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG011820.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 262aa MW: 27457.5 Da PI: 6.784

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG011820.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.1	2e-15	16	76	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ TRIDC2AG011820.3 16 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 76 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.3	9.1e-35	15	78	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC2AG011820.3 15 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 78 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
GGGGNSPDLQ PAEPVRSRWT PKPEQILILE SIFNSGMVNP PKDETVRIRK LLERFGAVGD 60 ANVFYWFQNR RSRSRRRQRQ LQAQAQAQAQ AQAQASAASS GSPPAPGGLG SAASSTSLGL 120 FAHGGAAYSS SSSSSSWPPS PPSVGMVGDM DQCGGGDDLF AISRQMGYAD GGGGGSGSSS 180 FSAAAAQQQQ QQLYYSCQPA GITVFINGVA TEVPRGPMDL RSMFGHDVML VHSSGGLLPV 240 DDYGVLMQSL QMGESYYLVS TQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	5e-36	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG011820.3